Detailed information NTG0234768

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CDO84_RS01145
• Genome accession: NZ_CP021911
• Coordinates: 258702..259850 (+)
• Length: 382 a.a.
• NCBI ID: WP_014662770.1
• Uniprot ID: A0A292GMY1
• Organism: Bacillus sp. MD-5
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 253702..264850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDO84_RS01125 (CDO84_01125)	-	254064..254744 (-)	681	WP_014662766.1	ABC transporter ATP-binding protein	-
CDO84_RS01130 (CDO84_01130)	-	254760..256235 (-)	1476	WP_040084174.1	ABC transporter permease	-
CDO84_RS01135 (CDO84_01135)	yclJ	256448..257131 (+)	684	WP_040084391.1	two-component system response regulator YclJ	-
CDO84_RS01140 (CDO84_01140)	yclK	257118..258539 (+)	1422	WP_082033070.1	two-component system sensor histidine kinase YclK	-
CDO84_RS01145 (CDO84_01145)	rapC	258702..259850 (+)	1149	WP_014662770.1	response regulator aspartate phosphatase RapC	Regulator
CDO84_RS01150 (CDO84_01150)	phrC	259834..259956 (+)	123	WP_014662771.1	phosphatase RapC inhibitor PhrC	Regulator
CDO84_RS01155 (CDO84_01155)	-	260054..260164 (-)	111	WP_040084173.1	YjcZ family sporulation protein	-
CDO84_RS01160 (CDO84_01160)	-	260307..261671 (-)	1365	WP_014662772.1	aspartate kinase	-
CDO84_RS01165 (CDO84_01165)	ceuB	262056..263006 (+)	951	WP_040084171.1	petrobactin ABC transporter permease YclN	Machinery gene
CDO84_RS01170 (CDO84_01170)	yclO	262999..263946 (+)	948	WP_040084169.1	petrobactin ABC transporter permease YclO	-
CDO84_RS01175 (CDO84_01175)	yclP	263940..264698 (+)	759	WP_040084168.1	petrobactin ABC transporter ATP-binding protein YclP	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45622.66 Da
• Isoelectric Point: 4.9649

>NTDB_id=234768 CDO84_RS01145 WP_014662770.1 258702..259850(+) (rapC) [Bacillus sp. MD-5]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDILD
PAIEYFEKAVSTFESSRIINSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPSEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=234768 CDO84_RS01145 WP_014662770.1 258702..259850(+) (rapC) [Bacillus sp. MD-5]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAAAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCACGAAACATTGACAGCAATCAGGCAGATCTTAAAGGGCTGCTCGACTATTACGTGAATTTTTT
CCGCGGGATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAACTTTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTACTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATCAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTGTTCGGGGTTAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGATATTCTTGAC
CCTGCCATTGAGTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCATCAATTCTCTGCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAGTGAAGAAGGA
ATCGAGCGATGTTTTCAATACCTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAGTGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: A0A292GMY1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	98.429	100	0.984
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568