Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CD007_RS02155 Genome accession   NZ_CP021903
Coordinates   424241..425191 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain ge28     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 419241..430191
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CD007_RS02130 (CD007_02130) rapC 420698..421846 (+) 1149 WP_043940053.1 response regulator aspartate phosphatase RapC Regulator
  CD007_RS02135 (CD007_02135) phrC 421830..421952 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  CD007_RS02140 (CD007_02140) yczM 422054..422143 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  CD007_RS02145 (CD007_02145) yczN 422225..422338 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  CD007_RS02150 (CD007_02150) thrD 422492..423856 (-) 1365 WP_043940054.1 aspartate kinase -
  CD007_RS02155 (CD007_02155) ceuB 424241..425191 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  CD007_RS02160 (CD007_02160) yclO 425184..426131 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  CD007_RS02165 (CD007_02165) yclP 426125..426883 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  CD007_RS02170 (CD007_02170) yclQ 426905..427858 (+) 954 WP_003246619.1 petrobactin ABC transporter substrate-binding protein YclQ -
  CD007_RS02175 (CD007_02175) cdaE 427905..429323 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=234584 CD007_RS02155 WP_014475804.1 424241..425191(+) (ceuB) [Bacillus subtilis strain ge28]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=234584 CD007_RS02155 WP_014475804.1 424241..425191(+) (ceuB) [Bacillus subtilis strain ge28]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTTATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment