Detailed information NTG0234582

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CD007_RS02130
• Genome accession: NZ_CP021903
• Coordinates: 420698..421846 (+)
• Length: 382 a.a.
• NCBI ID: WP_043940053.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ge28
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 415698..426846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CD007_RS02110 (CD007_02110)	yclH	416074..416754 (-)	681	WP_041850693.1	ABC transporter ATP-binding protein	-
CD007_RS02115 (CD007_02115)	yclI	416770..418230 (-)	1461	WP_041850694.1	ABC transporter permease	-
CD007_RS02120 (CD007_02120)	yclJ	418443..419126 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
CD007_RS02125 (CD007_02125)	yclK	419113..420534 (+)	1422	WP_072173981.1	two-component system sensor histidine kinase YclK	-
CD007_RS02130 (CD007_02130)	rapC	420698..421846 (+)	1149	WP_043940053.1	response regulator aspartate phosphatase RapC	Regulator
CD007_RS02135 (CD007_02135)	phrC	421830..421952 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
CD007_RS02140 (CD007_02140)	yczM	422054..422143 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
CD007_RS02145 (CD007_02145)	yczN	422225..422338 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
CD007_RS02150 (CD007_02150)	thrD	422492..423856 (-)	1365	WP_043940054.1	aspartate kinase	-
CD007_RS02155 (CD007_02155)	ceuB	424241..425191 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
CD007_RS02160 (CD007_02160)	yclO	425184..426131 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45709.75 Da
• Isoelectric Point: 4.9618

>NTDB_id=234582 CD007_RS02130 WP_043940053.1 420698..421846(+) (rapC) [Bacillus subtilis strain ge28]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVFTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=234582 CD007_RS02130 WP_043940053.1 420698..421846(+) (rapC) [Bacillus subtilis strain ge28]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAATGCCATTT
CGTCTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGATTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTTCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	99.476	100	0.995
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568