Detailed information NTG0023397

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACIAD_RS01220
• Genome accession: NC_005966
• Coordinates: 257836..259251 (-)
• Length: 471 a.a.
• NCBI ID: WP_004920725.1
• Uniprot ID: Q6FFD3
• Organism: Acinetobacter baylyi ADP1
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 252836..264251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIAD_RS01205 (ACIAD0255)	lptG	253903..254973 (+)	1071	WP_004920734.1	LPS export ABC transporter permease LptG	-
ACIAD_RS01210 (ACIAD0256)	gpmI	255095..256642 (+)	1548	WP_004920731.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACIAD_RS01215 (ACIAD0257)	-	256653..257834 (+)	1182	WP_004920728.1	S41 family peptidase	-
ACIAD_RS01220 (ACIAD0258)	pilR	257836..259251 (-)	1416	WP_004920725.1	sigma-54-dependent transcriptional regulator	Regulator
ACIAD_RS01225 (ACIAD0259)	pilS	259269..260846 (-)	1578	WP_004920722.1	sensor histidine kinase	Regulator
ACIAD_RS01230 (ACIAD0260)	-	260868..261503 (-)	636	WP_004920720.1	response regulator transcription factor GacA	-
ACIAD_RS01235 (ACIAD0262)	pbpG	261717..262775 (+)	1059	WP_004920717.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ACIAD_RS01240 (ACIAD0263)	thrC	262869..264008 (-)	1140	WP_004920712.1	threonine synthase	-

Sequence

Protein

• Length: 471 a.a.
• Molecular weight: 53023.70 Da
• Isoelectric Point: 6.3221

>NTDB_id=23397 ACIAD_RS01220 WP_004920725.1 257836..259251(-) (pilR) [Acinetobacter baylyi ADP1]
MTEQQPRVLLIDDEEDLCTLMQISLSRLGVQTDCAYNLQRAKQLLQQQHYDACLTDLNLPDGHGLDFVQYVTERFPYLPI
AVITAYGNMGIAIAALKAGAFDFVSKPINQQHLSQLIQTALHSSQTAPDNEQDTLEHRLLIGQSAPIEQLRIALRKIARS
QAPVFITGESGTGKEVVANLVHRLSNRNEGPFIALNCGAIPSELMESELFGHKKGSFTGATQDKQGLLLSAHGGSLFLDE
IAELPLTMQVKLLRAVQEKKIRPIGSDREIDVDFRVISASHQNLELLVQQGKFRQDLFFRIHVMDIQLPPLRERGQDILL
LAKHFIQHVCHEWDLPLKHLSPAAEHYLLHYDFPGNVRELRNMMERAITLSDGASIDLQQLNSSLLRQTTIPELDLTPIS
NTVSIAPTSQQNLEFPHEGLEQYLEKVEKDMLLNALNSTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDDG

Nucleotide

• Length: 1416 bp

>NTDB_id=23397 ACIAD_RS01220 WP_004920725.1 257836..259251(-) (pilR) [Acinetobacter baylyi ADP1]
ATGACCGAACAACAACCACGTGTTTTACTCATTGATGATGAAGAAGACCTTTGTACATTGATGCAAATCAGTCTTTCACG
TCTCGGCGTCCAGACAGATTGTGCCTACAACCTACAACGTGCCAAACAATTGTTACAACAACAACATTATGATGCCTGCC
TAACCGATCTCAACCTACCCGATGGACATGGACTTGATTTTGTTCAGTACGTTACAGAACGCTTTCCTTACTTACCCATT
GCCGTGATTACGGCGTATGGCAATATGGGCATTGCAATTGCAGCGTTAAAAGCCGGTGCTTTTGACTTTGTGAGCAAACC
CATCAATCAACAGCATCTTAGTCAACTGATTCAAACTGCACTGCATAGTAGCCAAACGGCACCAGACAATGAACAAGACA
CGCTTGAGCATCGTTTATTGATTGGTCAATCTGCACCCATTGAACAACTACGTATAGCACTTAGAAAAATTGCACGTTCG
CAGGCACCCGTATTTATTACAGGTGAGTCTGGAACAGGTAAGGAAGTGGTTGCCAATCTGGTACATCGCTTAAGCAATCG
CAATGAAGGGCCGTTTATTGCACTAAACTGTGGTGCAATTCCGTCAGAACTCATGGAGAGTGAGTTATTTGGCCATAAGA
AAGGCAGCTTCACAGGTGCCACACAAGATAAACAGGGATTACTTTTATCGGCACATGGAGGAAGTCTATTTCTGGATGAA
ATTGCAGAACTTCCTCTCACGATGCAAGTTAAATTACTACGCGCTGTTCAAGAAAAGAAAATCCGTCCAATTGGTTCAGA
TCGTGAAATTGATGTCGATTTTCGTGTGATCAGTGCCAGCCATCAGAATCTGGAACTTTTAGTCCAGCAAGGCAAATTTC
GTCAGGATTTATTCTTTCGAATTCATGTCATGGATATTCAGCTTCCTCCACTACGTGAGCGTGGACAAGATATTTTACTG
TTAGCCAAGCATTTTATTCAGCATGTTTGTCATGAATGGGACCTGCCTTTAAAGCATTTGAGCCCTGCGGCTGAACATTA
TCTACTACATTATGACTTTCCAGGAAATGTTCGGGAATTACGCAATATGATGGAACGTGCCATTACCTTAAGTGATGGAG
CATCAATAGACCTTCAGCAATTAAACAGCTCTCTACTACGCCAAACCACTATCCCAGAATTAGATTTAACACCGATTTCG
AATACAGTATCAATAGCACCAACATCTCAGCAAAATTTAGAATTTCCACATGAAGGACTTGAACAATATTTAGAAAAAGT
TGAAAAAGATATGCTGCTTAATGCGTTAAATAGTACACACTGGAATCGTACTTTAGCCGCAAAAAAATTAGGAATGAGTT
TTCGCTCTCTTCGCTATCGTCTGAAAAAATTTGGGCTTGATACTGATGATGGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-307)

• Bacterial regulatory protein, Fis family (HTH_8) (424-464)

3D structure

• AlphaFold DB: Q6FFD3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	72.979	99.788	0.728
pilR	Pseudomonas aeruginosa PAK	49.024	97.877	0.48