Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   BB161_RS07310 Genome accession   NZ_CP021862
Coordinates   1403972..1405789 (-) Length   605 a.a.
NCBI ID   WP_088186182.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain CUGBS591     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1398972..1410789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB161_RS07290 (BB161_07275) - 1399577..1400806 (-) 1230 WP_000489520.1 sensor histidine kinase -
  BB161_RS07295 (BB161_07280) - 1400806..1401492 (-) 687 WP_001264422.1 response regulator transcription factor -
  BB161_RS07300 (BB161_07285) - 1401494..1402120 (-) 627 WP_000449636.1 GTP pyrophosphokinase -
  BB161_RS07305 (BB161_07290) rcrQ 1402228..1403982 (-) 1755 WP_000851084.1 ABC transporter ATP-binding protein Regulator
  BB161_RS07310 (BB161_07295) rcrP 1403972..1405789 (-) 1818 WP_088186182.1 ABC transporter ATP-binding protein Regulator
  BB161_RS07315 (BB161_07300) - 1405836..1406276 (-) 441 WP_000431168.1 MarR family winged helix-turn-helix transcriptional regulator -
  BB161_RS07320 (BB161_07305) - 1406545..1408617 (+) 2073 WP_000726930.1 surface-anchored 5'-nucleotidase -
  BB161_RS07325 (BB161_07310) - 1408654..1409064 (-) 411 WP_000594935.1 peptide deformylase -
  BB161_RS07330 (BB161_07315) gdhA 1409134..1410483 (-) 1350 WP_000200435.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 67436.21 Da        Isoelectric Point: 6.7838

>NTDB_id=233875 BB161_RS07310 WP_088186182.1 1403972..1405789(-) (rcrP) [Streptococcus agalactiae strain CUGBS591]
MFNIFKRLNGKEWLMIVASTILVCLAVWMDLKTPEYMSDITRMLQTKGTKLEALWDPGLKMLAFSFGSFLVAVMVGFLGA
RTAASFTSRLRSDIFNHVMDYSDAEIKRFSIPSLLTRTTNDLTQLQILIVMGMQVVTRGPIMAIWALTKIWGKSDQWTGA
VGVAVIIVMILLSVLLLLAFPRQRQIQGFTDALNATTREALSGVRVIRAYNAEKYQTDKFKRENDDLTKLNLFVYRLMSL
MNPVMTVVSSGLTLAIYWIGSYLINDISVPKVTGTSVSVLAAKSAITDRVDLFSNMVVFSSYAMQVVMGFMMMVAIFIIM
PRALVSARRINEVLTLAPTVIFKENSHIQSAQKGQIEFQDVSFHYSKDSEAVIEHVSFKADTGQTVAFIGSTGSGKSTLV
NLVPRFYDATEGAIKLDGIDIKEYSHNDLNNKIGYIPQKAVLFSGTVRSNMILGESGREELSDEEIWQALELAQAKEFIE
AKEKGLDTEVAQGGSNFSGGQKQRLAIARALARHPEILIFDDSFSALDYKTDHILRHEVKEKTAAMTKLIVAQRISTIMD
ADLILVLDQGKVVGQGTHKELLSNNEVYQEIAYSQLSKEELENEN

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=233875 BB161_RS07310 WP_088186182.1 1403972..1405789(-) (rcrP) [Streptococcus agalactiae strain CUGBS591]
ATGTTTAATATTTTCAAGCGACTCAATGGTAAAGAATGGTTGATGATTGTGGCGAGTACTATATTAGTGTGTCTAGCGGT
TTGGATGGACCTAAAGACTCCAGAATATATGTCTGATATCACACGTATGTTGCAAACTAAAGGTACAAAGTTAGAGGCTC
TTTGGGATCCTGGACTAAAAATGCTTGCCTTTTCATTTGGTAGTTTTTTAGTAGCAGTAATGGTAGGTTTTTTAGGTGCT
AGGACAGCAGCTAGTTTTACTAGTCGATTACGTTCAGATATTTTTAACCATGTGATGGATTATTCTGATGCAGAAATTAA
GCGATTTTCTATCCCCTCTCTATTAACGCGCACAACTAACGACTTGACTCAGCTACAGATCCTTATTGTAATGGGAATGC
AGGTTGTTACCCGTGGACCAATTATGGCAATATGGGCTTTGACTAAAATTTGGGGTAAAAGCGATCAATGGACTGGGGCA
GTTGGAGTAGCGGTTATTATCGTTATGATATTACTTAGCGTTCTACTCTTACTCGCTTTTCCGAGACAACGTCAAATCCA
AGGTTTTACAGATGCGCTTAATGCAACTACTAGAGAGGCACTCTCTGGTGTTAGAGTTATTCGTGCCTACAATGCTGAAA
AGTATCAAACAGATAAGTTCAAACGTGAAAATGACGATTTAACAAAATTGAACCTTTTTGTTTATAGATTGATGTCGCTT
ATGAATCCTGTGATGACAGTGGTTTCATCTGGATTGACTTTAGCTATTTATTGGATTGGCTCTTATTTGATTAATGATAT
CTCTGTGCCTAAAGTTACAGGAACAAGTGTATCTGTATTGGCTGCTAAATCAGCTATCACTGATCGAGTGGATCTTTTTT
CAAACATGGTTGTTTTTTCATCTTATGCTATGCAAGTTGTTATGGGATTTATGATGATGGTAGCTATTTTTATCATCATG
CCTCGTGCTTTAGTATCGGCTAGACGTATTAATGAGGTACTAACTTTAGCCCCAACAGTAATTTTTAAAGAAAATAGTCA
TATTCAAAGTGCACAAAAAGGTCAAATTGAGTTTCAAGATGTGTCATTTCATTATAGTAAAGATTCTGAAGCGGTTATTG
AACATGTATCTTTCAAAGCAGATACTGGTCAGACAGTGGCATTTATTGGGTCTACAGGTTCTGGAAAATCCACTTTAGTC
AATTTAGTTCCACGTTTTTATGACGCCACAGAGGGGGCAATTAAACTTGATGGCATTGATATAAAGGAATACTCTCACAA
TGATTTGAATAATAAAATTGGCTATATTCCACAGAAAGCTGTTCTCTTTAGTGGGACAGTACGTTCTAATATGATTTTGG
GAGAGAGTGGCAGGGAGGAACTTAGTGATGAAGAAATTTGGCAAGCACTCGAATTAGCGCAAGCTAAAGAATTTATCGAG
GCTAAAGAAAAAGGATTAGATACAGAAGTCGCTCAAGGTGGTAGTAACTTTTCAGGAGGACAAAAACAACGCTTGGCAAT
TGCACGTGCTTTAGCACGTCACCCTGAAATTCTCATTTTTGATGACTCATTTTCAGCGTTAGATTATAAAACAGATCATA
TTTTACGCCATGAGGTGAAAGAAAAAACAGCTGCTATGACGAAATTAATTGTCGCTCAACGCATTTCAACTATCATGGAT
GCTGATCTCATTTTAGTGCTAGATCAAGGTAAAGTTGTTGGGCAAGGAACACATAAGGAATTGTTATCAAATAATGAAGT
GTATCAAGAGATAGCCTATTCTCAATTGTCTAAGGAGGAATTGGAAAATGAAAACTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(58-272)

ABC transporter (ABC_tran)

(374-523)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

77.944

99.669

0.777

Multiple sequence alignment