Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | CBI29_RS18180 | Genome accession | NZ_CP021782 |
| Coordinates | 3720687..3721160 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214060.1 | Uniprot ID | A0A0J0ZM89 |
| Organism | Acinetobacter baumannii strain A85 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3715687..3726160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBI29_RS18165 (CBI29_03559) | pilX | 3718316..3719134 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CBI29_RS18170 (CBI29_03560) | pilW | 3719131..3720132 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| CBI29_RS18175 (CBI29_03561) | pilV | 3720133..3720693 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| CBI29_RS18180 (CBI29_03562) | fimU | 3720687..3721160 (-) | 474 | WP_001214060.1 | pilus assembly FimT family protein | Machinery gene |
| CBI29_RS18185 (CBI29_03563) | ispH | 3721330..3722280 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CBI29_RS18190 (CBI29_03564) | gmk | 3722403..3723032 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| CBI29_RS18195 (CBI29_03565) | rpoZ | 3723105..3723383 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| CBI29_RS20425 | - | 3723422..3723552 (+) | 131 | Protein_3525 | hypothetical protein | - |
| CBI29_RS18200 (CBI29_03566) | - | 3723592..3725697 (+) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16883.50 Da Isoelectric Point: 8.5355
>NTDB_id=233527 CBI29_RS18180 WP_001214060.1 3720687..3721160(-) (fimU) [Acinetobacter baumannii strain A85]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTSTLAFNANGVVANITQDTLLSICNFRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=233527 CBI29_RS18180 WP_001214060.1 3720687..3721160(-) (fimU) [Acinetobacter baumannii strain A85]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTAGCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTTTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |