Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | CBI29_RS18155 | Genome accession | NZ_CP021782 |
| Coordinates | 3713957..3714439 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046489.1 | Uniprot ID | A0A0J0ZLV7 |
| Organism | Acinetobacter baumannii strain A85 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3708957..3719439
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBI29_RS18120 (CBI29_03550) | - | 3709068..3710099 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| CBI29_RS18125 (CBI29_03551) | - | 3710214..3711155 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| CBI29_RS18130 (CBI29_03552) | rplS | 3711207..3711575 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| CBI29_RS18135 (CBI29_03553) | trmD | 3711783..3712523 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| CBI29_RS18140 (CBI29_03554) | rimM | 3712569..3713117 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| CBI29_RS18145 (CBI29_03555) | rpsP | 3713137..3713388 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| CBI29_RS18150 (CBI29_03556) | pilE | 3713535..3713960 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| CBI29_RS18155 (CBI29_03557) | pilY2 | 3713957..3714439 (-) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| CBI29_RS18160 (CBI29_03558) | pilY1 | 3714450..3718304 (-) | 3855 | WP_000768943.1 | vWA domain-containing protein | Machinery gene |
| CBI29_RS18165 (CBI29_03559) | pilX | 3718316..3719134 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17657.94 Da Isoelectric Point: 8.4737
>NTDB_id=233522 CBI29_RS18155 WP_001046489.1 3713957..3714439(-) (pilY2) [Acinetobacter baumannii strain A85]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=233522 CBI29_RS18155 WP_001046489.1 3713957..3714439(-) (pilY2) [Acinetobacter baumannii strain A85]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
96.25 |
100 |
0.963 |
| comE | Acinetobacter baylyi ADP1 |
41.86 |
100 |
0.45 |