Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | CCD80_RS03085 | Genome accession | NZ_CP021725 |
| Coordinates | 530182..531135 (+) | Length | 317 a.a. |
| NCBI ID | WP_002259883.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 95-134 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 525182..536135
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD80_RS03055 (CCD80_03085) | - | 525383..525892 (+) | 510 | WP_002213852.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| CCD80_RS03060 (CCD80_03090) | - | 526409..526996 (-) | 588 | WP_002222659.1 | superoxide dismutase | - |
| CCD80_RS03070 (CCD80_03100) | dnaB | 527159..528565 (+) | 1407 | WP_002219448.1 | replicative DNA helicase | - |
| CCD80_RS03075 (CCD80_03105) | pilH | 528867..529535 (+) | 669 | WP_002259882.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CCD80_RS03080 (CCD80_03110) | pilV | 529565..530185 (+) | 621 | WP_149323756.1 | type IV pilus modification protein PilV | Machinery gene |
| CCD80_RS03085 (CCD80_03115) | pilJ | 530182..531135 (+) | 954 | WP_002259883.1 | PilW family protein | Machinery gene |
| CCD80_RS03090 (CCD80_03120) | pilK | 531114..531707 (+) | 594 | WP_002229321.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CCD80_RS03095 (CCD80_03125) | pilX | 531712..532185 (+) | 474 | WP_002230430.1 | PilX family type IV pilin | Machinery gene |
| CCD80_RS03100 (CCD80_03130) | - | 532678..533105 (-) | 428 | Protein_529 | AzlC family ABC transporter permease | - |
| CCD80_RS03105 (CCD80_03135) | dut | 533251..533700 (+) | 450 | Protein_530 | dUTP diphosphatase | - |
| CCD80_RS03110 (CCD80_03140) | dapC | 533778..534959 (+) | 1182 | Protein_531 | succinyldiaminopimelate transaminase | - |
| CCD80_RS03115 (CCD80_03145) | yaaA | 535122..535900 (+) | 779 | Protein_532 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35030.78 Da Isoelectric Point: 8.4318
>NTDB_id=232855 CCD80_RS03085 WP_002259883.1 530182..531135(+) (pilJ) [Neisseria meningitidis strain 95-134]
MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKDSLFSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASADTTVVSSCA
AISKPGKQILNLEDVKKELKIVSQDKERNGNIARQRHVVNAYAVGRIAGEEGLFRFQLNEKGEWGNPQLLVKKINKMDIR
YIYVSGCPEDDDAGKEETFRYTDKFNSAQDAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL
MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFG
CFNMSEHIEQDVVSDVTQKDSLFSLKRNSTRNSTNKLIPIAESSNIGYQGFIQRLNALIFQYGIDDVNASADTTVVSSCA
AISKPGKQILNLEDVKKELKIVSQDKERNGNIARQRHVVNAYAVGRIAGEEGLFRFQLNEKGEWGNPQLLVKKINKMDIR
YIYVSGCPEDDDAGKEETFRYTDKFNSAQDAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL
Nucleotide
Download Length: 954 bp
>NTDB_id=232855 CCD80_RS03085 WP_002259883.1 530182..531135(+) (pilJ) [Neisseria meningitidis strain 95-134]
ATGAGACGTAAAATGCTAAACGTACCAAAAGGCAGTTATGATGGTATGAAAGGTTTTACCATTATTGAATTTTTGGTTGC
GGGCATGCTCAGTATGATTGTCCTGATGGCGGTCGGATCGAGTTACTTCACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCTATTCAACAGGATTTGCGGAATGCGGCAACATTAATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAGACTCTCTTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTACAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGGATATCAGGGTTTTATCCAGC
GCCTTAACGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGATACTACCGTCGTCAGCAGCTGTGCC
GCAATATCGAAACCGGGTAAGCAAATCCTTAATTTAGAAGATGTAAAAAAAGAATTGAAGATTGTGAGTCAGGATAAGGA
GCGAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGTTGGTTAAAAAGATTAATAAAATGGATATACGG
TATATTTATGTTTCCGGCTGTCCTGAAGATGACGATGCCGGCAAAGAGGAAACATTCAGATATACGGATAAATTCAACAG
CGCCCAAGATGCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGAGTAGCGGTACTGATACCAAGATTGCCGCTTCTTCAG
ACAATCATATTTATGCTTACCGTATCGATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAGACGTAAAATGCTAAACGTACCAAAAGGCAGTTATGATGGTATGAAAGGTTTTACCATTATTGAATTTTTGGTTGC
GGGCATGCTCAGTATGATTGTCCTGATGGCGGTCGGATCGAGTTACTTCACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCTATTCAACAGGATTTGCGGAATGCGGCAACATTAATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGAACAGGATGTTGTTTCCGATGTGACGCAAAAAGACTCTCTTTTTTCCTTAAAAAG
GAACAGTACAAGGAACAGTACAAATAAACTTATCCCCATAGCGGAATCTTCAAATATCGGATATCAGGGTTTTATCCAGC
GCCTTAACGCATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGATACTACCGTCGTCAGCAGCTGTGCC
GCAATATCGAAACCGGGTAAGCAAATCCTTAATTTAGAAGATGTAAAAAAAGAATTGAAGATTGTGAGTCAGGATAAGGA
GCGAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGGTGAGGAAGGTTTGT
TCCGCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGTTGGTTAAAAAGATTAATAAAATGGATATACGG
TATATTTATGTTTCCGGCTGTCCTGAAGATGACGATGCCGGCAAAGAGGAAACATTCAGATATACGGATAAATTCAACAG
CGCCCAAGATGCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGAGTAGCGGTACTGATACCAAGATTGCCGCTTCTTCAG
ACAATCATATTTATGCTTACCGTATCGATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
82.334 |
100 |
0.823 |