Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   S100141_RS00450 Genome accession   NZ_CP021669
Coordinates   88380..90689 (+) Length   769 a.a.
NCBI ID   WP_087634938.1    Uniprot ID   -
Organism   Bacillus licheniformis strain SRCM100141     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 83380..95689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100141_RS00420 (S100141_00088) - 84940..86163 (+) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  S100141_RS00425 (S100141_00089) - 86170..86511 (-) 342 WP_014418765.1 hypothetical protein -
  S100141_RS00435 (S100141_00090) degQ 86976..87116 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  S100141_RS00440 (S100141_00091) comQ 87247..88110 (+) 864 WP_269768362.1 class 1 isoprenoid biosynthesis enzyme Regulator
  S100141_RS00445 (S100141_00092) - 88184..88360 (+) 177 WP_087634937.1 competence pheromone ComX -
  S100141_RS00450 (S100141_00093) comP 88380..90689 (+) 2310 WP_087634938.1 histidine kinase Regulator
  S100141_RS00455 (S100141_00094) comA 90808..91413 (+) 606 WP_087634995.1 response regulator transcription factor Regulator
  S100141_RS00460 (S100141_00095) - 91435..91818 (+) 384 WP_017419422.1 hotdog fold thioesterase -
  S100141_RS00465 (S100141_00096) mnhG 91858..92232 (-) 375 WP_017419421.1 monovalent cation/H(+) antiporter subunit G -
  S100141_RS00470 (S100141_00097) - 92216..92500 (-) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  S100141_RS00475 (S100141_00098) - 92500..92976 (-) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  S100141_RS00480 (S100141_00099) - 92982..94463 (-) 1482 WP_017419418.1 Na+/H+ antiporter subunit D -
  S100141_RS00485 (S100141_00100) - 94456..94796 (-) 341 Protein_95 Na(+)/H(+) antiporter subunit C -
  S100141_RS00490 (S100141_00101) - 94796..95227 (-) 432 WP_087634939.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89202.48 Da        Isoelectric Point: 8.2927

>NTDB_id=232329 S100141_RS00450 WP_087634938.1 88380..90689(+) (comP) [Bacillus licheniformis strain SRCM100141]
MKNFIKQFTISVIILSLVYVCYVSYININGIIIGTKVIENKNKQFQVIEMSETSYGKFVGLEKGDIILKINNEKPSAKFL
KGDNLSHIKSLDVSRNGKQIHLDDFDIVNLDKSYSFFVFVLPLVFYFLSIVCIFYILKVNQTRKSFAGYILILFLLDISI
AYISAGGPFRGHSFNRYVNLFTFIASPIFYLQFIQQYFEELGKKFANRLINFLYIFPIFNIIMEFFRKKLPFDNIITNLN
LISFFLVTLSGFVLVFYHLYKYKYSEHAYILKVLILTNTLSFAPFLLFYVVPNILTGDYIFPALASASLLVLIPFGLVYQ
FVANKIFDIEFILGRMRYYTLLAVIPTLVIVGVLSVWAGTDELQMNPIRQTVFIFIVMFAVFYFKEIIDFKFRLKRFSEK
FNYQDSIFKYTQFIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILFHDKKDNEPDWEMYSKEFKKVTSEIGKI
IELNRGFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKL
MFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYD
LGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDG
VGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=232329 S100141_RS00450 WP_087634938.1 88380..90689(+) (comP) [Bacillus licheniformis strain SRCM100141]
GTGAAAAACTTTATTAAACAATTCACTATTTCAGTTATTATCTTAAGCCTCGTTTATGTTTGCTATGTTTCTTATATAAA
CATAAATGGGATTATAATCGGAACAAAAGTTATTGAAAACAAAAACAAACAATTCCAAGTAATAGAGATGTCAGAAACTT
CTTACGGGAAATTCGTAGGTTTAGAAAAAGGCGACATCATTCTAAAAATCAACAATGAAAAACCATCTGCTAAATTTTTA
AAAGGGGATAATCTTAGTCATATCAAAAGTTTAGATGTGAGCAGAAATGGAAAGCAAATTCATTTAGATGATTTTGATAT
TGTCAATTTAGACAAATCCTATAGCTTTTTTGTATTCGTTCTTCCACTTGTGTTTTATTTTTTAAGTATAGTATGTATAT
TTTACATTCTAAAGGTGAATCAAACAAGAAAATCGTTTGCGGGATACATTTTAATTTTGTTCTTGTTAGATATTTCAATT
GCTTATATAAGCGCAGGAGGACCATTTAGAGGACATTCATTTAACAGATATGTCAATTTGTTCACATTTATAGCTTCTCC
TATATTTTATCTTCAGTTCATACAACAATATTTTGAGGAATTAGGAAAGAAGTTTGCAAATCGTCTAATCAATTTCTTAT
ATATATTCCCGATTTTTAATATTATCATGGAGTTTTTTCGTAAGAAATTACCTTTTGACAACATTATAACAAACCTTAAT
CTTATCTCGTTTTTTCTCGTTACTCTTTCAGGTTTTGTTCTCGTGTTCTATCACTTATATAAATATAAATATTCAGAGCA
TGCTTATATTTTGAAAGTTTTAATTCTGACAAATACACTTTCTTTTGCTCCATTTTTACTTTTTTACGTCGTACCTAATA
TTTTAACTGGTGATTATATCTTTCCAGCACTGGCATCAGCCTCATTGCTTGTTCTTATTCCATTTGGATTAGTATATCAG
TTTGTTGCAAATAAAATATTTGATATAGAATTTATATTAGGAAGAATGAGATATTATACTTTACTGGCTGTAATCCCAAC
GCTAGTTATTGTCGGAGTTTTATCGGTCTGGGCGGGAACAGATGAGCTTCAAATGAATCCTATTAGACAGACTGTTTTCA
TCTTTATCGTAATGTTTGCTGTATTTTACTTTAAAGAAATAATAGATTTTAAATTTCGTTTAAAACGTTTTTCTGAAAAA
TTTAATTATCAAGATAGTATATTCAAATATACCCAGTTTATCAGAAGTATAACATCTTTAAAACAAATGTTTAAAGAACT
AAAAAAGACGATTCTGGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATTTC
ATGATAAAAAGGATAATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATC
ATTGAGCTAAACCGCGGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTAT
TAATACACCGAGACTGACACGAGATGAGATTTCATGGCTGAAAACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATG
TGATACAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTG
ATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTT
GAAGCGCCAGTGTGAACTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATC
AGATGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGAT
TTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGG
CCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGA
AGCATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGT
GTCGGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCT
TGACGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(569-638)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

75.616

100

0.758


Multiple sequence alignment