Detailed information NTG0232157

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: B4U42_RS00430
• Genome accession: NZ_CP021644
• Coordinates: 85904..87031 (-)
• Length: 375 a.a.
• NCBI ID: WP_005712671.1
• Uniprot ID: -
• Organism: Glaesserella parasuis 29755
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 80904..92031

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B4U42_RS12455	-	82760..83005 (+)	246	WP_162627876.1	hypothetical protein	-
B4U42_RS00415 (B4U42_00405)	-	83241..84029 (-)	789	WP_005712677.1	heme ABC transporter ATP-binding protein	-
B4U42_RS00420 (B4U42_00410)	-	84029..85015 (-)	987	WP_005712675.1	iron ABC transporter permease	-
B4U42_RS00425 (B4U42_00415)	-	85015..85851 (-)	837	WP_005712673.1	ABC transporter substrate-binding protein	-
B4U42_RS00430 (B4U42_00420)	dprA	85904..87031 (-)	1128	WP_005712671.1	DNA-processing protein DprA	Machinery gene
B4U42_RS00435 (B4U42_00425)	def	87367..87879 (+)	513	WP_005712670.1	peptide deformylase	-
B4U42_RS00440 (B4U42_00430)	rfaD	87891..88817 (+)	927	WP_005712668.1	ADP-glyceromanno-heptose 6-epimerase	-
B4U42_RS12310	-	88909..89052 (+)	144	WP_005712666.1	hypothetical protein	-
B4U42_RS00445 (B4U42_00435)	-	89033..89701 (+)	669	WP_005712663.1	hypothetical protein	-
B4U42_RS00455 (B4U42_00445)	selA	90141..91526 (+)	1386	WP_005712660.1	L-seryl-tRNA(Sec) selenium transferase	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 41728.73 Da
• Isoelectric Point: 5.2505

>NTDB_id=232157 B4U42_RS00430 WP_005712671.1 85904..87031(-) (dprA) [Glaesserella parasuis 29755]
MTHLTKLLALLQVPQLGAQRIGRLLSEVDFGEFCQYDKTALKQMGWNERQIQRWFNPEHKWIDQALQWAEQDQQRILTLF
DEDYPFLLKQISTAPPVLFVRGNVESLSLPQIAIVGSRDYSHYGEHCAGHFSAELVKYQLAVTSGLAIGIDGFCHQRAVN
ENGITIAVLGSGLDQVYPARHKKLAEQIVDTSGALVSEFFPSQPPIAENFPRRNRIISGLSLGTLVIEATVNSGSLITAR
YALEQGREVFALPNSVQNPYSEGCHKLIKEGALLVENVEDILEAIAWQRQSVHIQPSLFDTKPKQAVKSDPKFAKNLPEL
TACQQQLFEQISLEPISIDDLAKATDMAVETTLIELLNLELLGVVKQVSGGYVIT

Nucleotide

• Length: 1128 bp

>NTDB_id=232157 B4U42_RS00430 WP_005712671.1 85904..87031(-) (dprA) [Glaesserella parasuis 29755]
ATGACACATCTCACAAAATTATTAGCCCTGTTACAAGTGCCACAGCTTGGCGCGCAACGTATCGGGCGGTTACTCTCGGA
AGTGGACTTTGGCGAATTTTGTCAATATGACAAAACCGCATTAAAGCAAATGGGCTGGAATGAACGGCAAATTCAGCGTT
GGTTTAATCCTGAGCATAAATGGATCGATCAGGCGTTGCAATGGGCGGAACAGGATCAGCAACGGATTTTAACTTTATTT
GACGAAGATTATCCTTTCTTGCTGAAGCAGATCAGCACCGCTCCTCCAGTGCTTTTTGTGCGGGGGAATGTTGAAAGTTT
ATCGTTACCGCAGATAGCCATCGTTGGCAGTCGAGATTATTCCCACTATGGCGAACACTGTGCTGGGCATTTTTCGGCGG
AATTAGTGAAATATCAGCTTGCTGTCACCAGTGGCTTAGCCATAGGCATAGATGGATTTTGCCATCAACGTGCGGTCAAT
GAAAACGGGATTACTATTGCGGTTTTAGGCAGTGGTTTAGACCAAGTTTACCCTGCTCGCCACAAAAAACTTGCGGAACA
AATCGTTGATACAAGCGGTGCATTAGTGTCGGAATTTTTCCCTAGCCAGCCACCGATTGCTGAAAATTTCCCTAGACGAA
ATCGCATCATCAGCGGATTATCGCTAGGCACATTGGTTATTGAAGCCACGGTGAACAGTGGCTCGCTCATCACTGCTCGT
TATGCGTTAGAGCAAGGACGAGAAGTTTTTGCATTGCCAAACTCAGTACAAAACCCTTATAGCGAAGGGTGCCATAAATT
GATTAAAGAAGGAGCATTACTGGTTGAAAATGTTGAAGATATTTTAGAAGCGATTGCGTGGCAACGGCAGTCAGTGCATA
TTCAACCAAGTCTATTTGATACGAAACCTAAACAAGCGGTGAAATCCGACCCCAAATTTGCAAAAAATCTACCTGAACTG
ACCGCTTGTCAGCAACAATTGTTTGAACAGATTAGCCTTGAGCCGATCAGCATTGATGATCTTGCCAAAGCGACGGATAT
GGCGGTAGAAACCACATTGATTGAGCTGCTGAATTTGGAGTTGTTGGGCGTAGTGAAGCAGGTGAGTGGGGGGTATGTAA
TCACTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (313-371)

• DNA recombination-mediator protein A (DNA_processg_A) (69-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	97.6	100	0.976
dprA	Haemophilus influenzae Rd KW20	53.235	90.667	0.483
dprA	Vibrio campbellii strain DS40M4	46.649	99.467	0.464
dprA	Vibrio cholerae strain A1552	44.681	100	0.448
dprA	Legionella pneumophila strain ERS1305867	39.153	100	0.395
dprA	Neisseria gonorrhoeae MS11	42.994	83.733	0.36