Detailed information NTG0231855

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: CCD81_RS11540
• Genome accession: NZ_CP021523
• Coordinates: 2030101..2030550 (+)
• Length: 149 a.a.
• NCBI ID: WP_002214937.1
• Uniprot ID: A0AA44U8B7
• Organism: Neisseria meningitidis strain 98-182
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2031536..2032015	2030101..2030550	flank	986

Gene organization within MGE regions

Location: 2030101..2032015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCD81_RS11540 (CCD81_11800)	comP	2030101..2030550 (+)	450	WP_002214937.1	type IV pilin protein	Machinery gene
CCD81_RS13210 (CCD81_11805)	-	2030640..2030980 (-)	341	Protein_1961	5'-nucleotidase	-
CCD81_RS11550 (CCD81_11810)	-	2031092..2031304 (-)	213	WP_002224145.1	SWIM zinc finger domain-containing protein	-
CCD81_RS11555 (CCD81_11820)	-	2031536..2032009 (+)	474	Protein_1963	transposase	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16834.81 Da
• Isoelectric Point: 9.7951

>NTDB_id=231855 CCD81_RS11540 WP_002214937.1 2030101..2030550(+) (comP) [Neisseria meningitidis strain 98-182]
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK

Nucleotide

• Length: 450 bp

>NTDB_id=231855 CCD81_RS11540 WP_002214937.1 2030101..2030550(+) (comP) [Neisseria meningitidis strain 98-182]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCCTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-107)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria gonorrhoeae MS11	100	100	1
comP	Neisseria meningitidis 8013	99.329	100	0.993
comP	Neisseria subflava NJ9703	49.66	98.658	0.49