Detailed information
Bioinformatically predicted
Overview
| Name | pilX | Type | Machinery gene |
| Locus tag | CCD81_RS03095 | Genome accession | NZ_CP021523 |
| Coordinates | 534525..534998 (+) | Length | 157 a.a. |
| NCBI ID | WP_002230430.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 98-182 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 529525..539998
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD81_RS03070 (CCD81_03105) | dnaB | 529972..531378 (+) | 1407 | WP_002219448.1 | replicative DNA helicase | - |
| CCD81_RS03075 (CCD81_03110) | pilH | 531680..532348 (+) | 669 | WP_002259882.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CCD81_RS03080 (CCD81_03115) | pilV | 532378..532998 (+) | 621 | WP_149323756.1 | type IV pilus modification protein PilV | Machinery gene |
| CCD81_RS03085 (CCD81_03120) | pilJ | 532995..533948 (+) | 954 | WP_002259883.1 | PilW family protein | Machinery gene |
| CCD81_RS03090 (CCD81_03125) | pilK | 533927..534520 (+) | 594 | WP_002229321.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CCD81_RS03095 (CCD81_03130) | pilX | 534525..534998 (+) | 474 | WP_002230430.1 | PilX family type IV pilin | Machinery gene |
| CCD81_RS03110 (CCD81_03155) | - | 536700..537128 (-) | 429 | Protein_529 | AzlC family ABC transporter permease | - |
| CCD81_RS03115 (CCD81_03160) | dut | 537270..537722 (+) | 453 | WP_002229326.1 | dUTP diphosphatase | - |
| CCD81_RS03120 (CCD81_03165) | dapC | 537799..538986 (+) | 1188 | WP_002259885.1 | succinyldiaminopimelate transaminase | - |
| CCD81_RS03125 (CCD81_03170) | yaaA | 539149..539928 (+) | 780 | WP_002229325.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17472.18 Da Isoelectric Point: 9.1946
>NTDB_id=231827 CCD81_RS03095 WP_002230430.1 534525..534998(+) (pilX) [Neisseria meningitidis strain 98-182]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=231827 CCD81_RS03095 WP_002230430.1 534525..534998(+) (pilX) [Neisseria meningitidis strain 98-182]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilX | Neisseria meningitidis 8013 |
98.089 |
100 |
0.981 |
| pilL | Neisseria gonorrhoeae MS11 |
87.261 |
100 |
0.873 |