Detailed information
Bioinformatically predicted
Overview
| Name | pilX | Type | Machinery gene |
| Locus tag | CCD85_RS03095 | Genome accession | NZ_CP021519 |
| Coordinates | 531219..531692 (+) | Length | 157 a.a. |
| NCBI ID | WP_002229319.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 11-14 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 526219..536692
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD85_RS03070 (CCD85_03080) | dnaB | 526678..528084 (+) | 1407 | WP_002219448.1 | replicative DNA helicase | - |
| CCD85_RS03075 (CCD85_03085) | pilH | 528386..529054 (+) | 669 | WP_002259882.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CCD85_RS03080 (CCD85_03090) | pilV | 529084..529704 (+) | 621 | WP_002253554.1 | type IV pilus modification protein PilV | Machinery gene |
| CCD85_RS03085 (CCD85_03095) | pilJ | 529701..530642 (+) | 942 | WP_149488390.1 | PilW family protein | Machinery gene |
| CCD85_RS03090 (CCD85_03100) | pilK | 530621..531214 (+) | 594 | WP_002229321.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CCD85_RS03095 (CCD85_03105) | pilX | 531219..531692 (+) | 474 | WP_002229319.1 | PilX family type IV pilin | Machinery gene |
| CCD85_RS03110 (CCD85_03120) | - | 533505..533933 (-) | 429 | Protein_527 | AzlC family ABC transporter permease | - |
| CCD85_RS03115 (CCD85_03125) | dut | 534075..534527 (+) | 453 | WP_002229326.1 | dUTP diphosphatase | - |
| CCD85_RS03120 (CCD85_03130) | dapC | 534604..535791 (+) | 1188 | WP_002259885.1 | succinyldiaminopimelate transaminase | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17450.13 Da Isoelectric Point: 8.8574
>NTDB_id=231633 CCD85_RS03095 WP_002229319.1 531219..531692(+) (pilX) [Neisseria meningitidis strain 11-14]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVDFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVDFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=231633 CCD85_RS03095 WP_002229319.1 531219..531692(+) (pilX) [Neisseria meningitidis strain 11-14]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGGATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGGATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGCCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilX | Neisseria meningitidis 8013 |
97.452 |
100 |
0.975 |
| pilL | Neisseria gonorrhoeae MS11 |
87.261 |
100 |
0.873 |