Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   S101359_RS15825 Genome accession   NZ_CP021500
Coordinates   3190741..3193035 (-) Length   764 a.a.
NCBI ID   WP_088117877.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SRCM101359     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3185741..3198035
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101359_RS15785 (S101359_03116) - 3186212..3186643 (+) 432 WP_003327161.1 Na(+)/H(+) antiporter subunit B -
  S101359_RS15790 (S101359_03117) - 3186643..3186984 (+) 342 WP_003327160.1 Na(+)/H(+) antiporter subunit C -
  S101359_RS15795 (S101359_03118) - 3186977..3188458 (+) 1482 WP_088117873.1 Na+/H+ antiporter subunit D -
  S101359_RS15800 (S101359_03119) - 3188464..3188940 (+) 477 WP_088117874.1 Na+/H+ antiporter subunit E -
  S101359_RS15805 (S101359_03120) - 3188940..3189224 (+) 285 WP_061570549.1 Na(+)/H(+) antiporter subunit F1 -
  S101359_RS15810 (S101359_03121) mnhG 3189208..3189582 (+) 375 WP_088117875.1 monovalent cation/H(+) antiporter subunit G -
  S101359_RS15815 (S101359_03122) - 3189621..3190001 (-) 381 WP_088117876.1 hotdog fold thioesterase -
  S101359_RS15820 (S101359_03123) comA 3190019..3190660 (-) 642 WP_003327154.1 response regulator transcription factor Regulator
  S101359_RS15825 (S101359_03124) comP 3190741..3193035 (-) 2295 WP_088117877.1 histidine kinase Regulator
  S101359_RS15830 (S101359_03125) comX 3193043..3193204 (-) 162 WP_010789788.1 competence pheromone ComX -
  S101359_RS15835 (S101359_03126) - 3193220..3194080 (-) 861 WP_088118513.1 polyprenyl synthetase family protein -
  S101359_RS15840 (S101359_03127) degQ 3194264..3194407 (-) 144 WP_003327149.1 degradation enzyme regulation protein DegQ Regulator
  S101359_RS15845 (S101359_03128) - 3194867..3195226 (+) 360 WP_088117878.1 hypothetical protein -
  S101359_RS15850 (S101359_03129) - 3195245..3196477 (-) 1233 WP_003327147.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 764 a.a.        Molecular weight: 88246.81 Da        Isoelectric Point: 8.3822

>NTDB_id=231316 S101359_RS15825 WP_088117877.1 3190741..3193035(-) (comP) [Bacillus atrophaeus strain SRCM101359]
MKARYNKISILLVLMSLVYVIYLTYISNNNLLVGASVSKNKKSDVVITNVEDYTMAYYSGIQKGDIVKSVNNSNINPNEI
KMNKLKNVSSMIVERDGKNVELKLTLLNDKNFSTYLIPLIFYAVCLFCCLFILKINESKNLLSALILIVFLLSASIAFIS
AGGSTKGDLLSRCMMVLTLVSVPLNYLLFLYQYFKELGTILFSKKVFILYLIPAINVVCELFRSYLFFRDYVPKLNLLSF
FILFIIVGIYFVLILMKNKDTEQAHIIKILAIINIFSFSPFLCLYLIPYVFLNAHYVSSFLSASFMLLIPFSLVYQFMTN
KIYNIDFILSRLKYYGFLALTPTIILISTIELFRSPESDYYNIKLTLLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SVYKFTQLIRDSSSVTQVFGELKTTILEVLLVSRAHIYEVTFDGNIKPYEEVNLHSYHDTYQKQFSKVISEIGKIVEFNN
GFVMKIGERGGKSFVILCLSKMNTPRLTLEEISWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEDPCKNEVQDKLVQMNQQMSDVILMTRETCHELRPQLLYDLGLVK
ALSKLVAQQQESAPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAMKHSQAGEVLIMLISFQNKIVLHYEDDGVGFDK
EKLNEQSMSMGLSGIKERVRALDGHLRIDTSVGNGLRADIEMEL

Nucleotide


Download         Length: 2295 bp        

>NTDB_id=231316 S101359_RS15825 WP_088117877.1 3190741..3193035(-) (comP) [Bacillus atrophaeus strain SRCM101359]
ATGAAGGCTAGATATAATAAAATTTCTATTCTGTTAGTTTTGATGAGCTTGGTATATGTAATATATTTAACTTATATTAG
TAATAATAATTTGTTAGTTGGAGCATCTGTTTCTAAAAATAAAAAAAGTGACGTTGTAATCACGAATGTAGAAGATTATA
CAATGGCTTATTACAGCGGTATACAAAAAGGCGATATTGTAAAAAGTGTTAATAATAGCAATATAAATCCAAATGAAATA
AAAATGAATAAACTGAAAAATGTGAGTTCAATGATTGTGGAGAGAGATGGCAAGAATGTTGAGCTTAAGCTGACTTTATT
AAATGATAAGAATTTTTCTACCTATTTAATACCATTAATATTTTATGCCGTTTGTTTATTTTGTTGTTTATTTATATTGA
AAATAAATGAATCAAAGAATTTACTATCGGCTTTAATATTAATCGTTTTTCTATTATCAGCCTCTATTGCTTTTATAAGT
GCGGGAGGATCTACTAAGGGAGATTTACTTAGCAGATGTATGATGGTATTAACATTAGTATCTGTGCCGCTTAACTATCT
TCTCTTTCTTTATCAATATTTTAAAGAGTTAGGCACTATATTATTTAGTAAAAAAGTTTTTATTTTGTATTTGATTCCAG
CAATAAATGTAGTATGTGAACTGTTTCGTTCTTATCTTTTTTTCAGAGATTATGTGCCTAAACTAAATCTACTTTCGTTT
TTTATTTTATTCATAATAGTAGGTATTTATTTCGTTCTTATTTTAATGAAAAATAAAGATACTGAACAAGCACATATTAT
AAAAATTCTTGCGATAATTAATATCTTTTCATTTTCGCCGTTCTTGTGTTTATATCTGATACCTTATGTTTTCTTAAATG
CGCATTATGTTTCTTCATTTTTATCTGCTTCATTTATGTTGCTTATACCATTTTCTTTGGTTTATCAATTTATGACAAAT
AAAATTTATAATATTGATTTTATTTTAAGTAGATTAAAATACTATGGTTTTTTAGCTCTAACTCCAACAATTATTCTAAT
TTCTACAATCGAGTTATTTCGTAGCCCGGAAAGTGATTATTATAATATTAAACTAACTTTGTTAATTTACATTATTATGC
TTGCAGTTTTTTATTATAAAGAAGTGCTGGATTTTAGGTTTAGATTAAAAAGGGTCTCTGAAAAGTTTAATTATCAAGAC
AGTGTATATAAATTTACACAACTAATTAGAGACTCATCTTCTGTAACGCAGGTATTTGGAGAACTAAAAACTACCATTCT
TGAGGTTTTACTTGTAAGCCGAGCCCATATATATGAAGTTACATTTGATGGGAATATAAAACCATACGAGGAAGTAAACT
TACATTCATATCATGATACCTATCAAAAACAATTTAGTAAAGTAATATCTGAAATTGGGAAAATCGTTGAATTTAATAAC
GGTTTTGTCATGAAGATAGGTGAGCGCGGGGGTAAATCATTTGTTATACTTTGCTTATCTAAAATGAATACTCCCCGTCT
CACGCTTGAAGAAATTTCTTGGCTTAAAACATTGGCTTTTTATACAAATGTCTCGATTGAAAACGTCATGAAAATTGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAACCCAGTCTGGCTCAAAAAACTGATGTACACTATCGAA
GAAAAACAACGATCCGACCTGGCGCGTGACCTCCATGACTCCGTTCTTCAGGATTTGATCTCCTTAAAACGACAATGCGA
GCTGTTTCTTGCTGATTTTAAGAAGGAAGATCCTTGTAAGAATGAGGTGCAGGACAAGCTGGTGCAAATGAATCAGCAGA
TGTCTGATGTGATTTTGATGACGAGGGAGACGTGCCATGAATTGCGGCCGCAGCTCTTGTATGATTTGGGATTGGTAAAG
GCGCTGTCAAAGCTTGTTGCGCAGCAGCAGGAAAGCGCGCCGTTTCATATTCGGCTGAATACGGGGAGGTTTACGGCATC
GCTCGATCTTGATTCTCAGCTGAATTTGTACCGGATTATTCAAGAGTTTTTATCAAATGCCATGAAGCATTCCCAAGCCG
GCGAGGTGCTGATTATGCTGATCAGTTTTCAAAATAAAATTGTTCTTCATTATGAGGATGACGGCGTTGGCTTTGATAAG
GAAAAATTGAATGAACAATCGATGAGTATGGGGCTTTCGGGCATTAAAGAGCGGGTCCGTGCGTTAGACGGGCACCTTCG
GATCGATACAAGCGTAGGAAATGGGTTGCGAGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.57

100

0.562


Multiple sequence alignment