Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   S101359_RS02145 Genome accession   NZ_CP021500
Coordinates   438746..438865 (+) Length   39 a.a.
NCBI ID   WP_004430266.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SRCM101359     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 433746..443865
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101359_RS02130 (S101359_00419) yclJ 435329..436015 (+) 687 WP_088116504.1 two-component system response regulator YclJ -
  S101359_RS02135 (S101359_00420) - 436002..437420 (+) 1419 WP_088116505.1 HAMP domain-containing sensor histidine kinase -
  S101359_RS02140 (S101359_00421) rapC 437614..438762 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  S101359_RS02145 (S101359_00422) phrC 438746..438865 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  S101359_RS02150 - 438999..439106 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  S101359_RS02155 - 439310..439417 (-) 108 WP_035192051.1 YjcZ family sporulation protein -
  S101359_RS02160 (S101359_00423) - 439524..440888 (-) 1365 WP_088116506.1 aspartate kinase -
  S101359_RS02165 (S101359_00424) ceuB 441321..442271 (+) 951 WP_010789705.1 ABC transporter permease Machinery gene
  S101359_RS02170 (S101359_00425) - 442264..443211 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4111.89 Da        Isoelectric Point: 7.9858

>NTDB_id=231263 S101359_RS02145 WP_004430266.1 438746..438865(+) (phrC) [Bacillus atrophaeus strain SRCM101359]
MKLKSKLLIICLAAAAVFATVGVSNAEAPDYQVTERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=231263 S101359_RS02145 WP_004430266.1 438746..438865(+) (phrC) [Bacillus atrophaeus strain SRCM101359]
ATGAAATTGAAATCTAAATTGCTCATTATTTGTTTGGCTGCAGCTGCTGTGTTTGCAACAGTTGGAGTGTCCAATGCTGA
AGCGCCTGATTATCAGGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

75

100

0.769

Multiple sequence alignment