Detailed information NTG0231262

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: S101359_RS02140
• Genome accession: NZ_CP021500
• Coordinates: 437614..438762 (+)
• Length: 382 a.a.
• NCBI ID: WP_004430265.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SRCM101359
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 432614..443762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
S101359_RS02120 (S101359_00417)	-	432933..433613 (-)	681	WP_088116502.1	ABC transporter ATP-binding protein	-
S101359_RS02125 (S101359_00418)	-	433631..435115 (-)	1485	WP_088116503.1	ABC transporter permease	-
S101359_RS02130 (S101359_00419)	yclJ	435329..436015 (+)	687	WP_088116504.1	two-component system response regulator YclJ	-
S101359_RS02135 (S101359_00420)	-	436002..437420 (+)	1419	WP_088116505.1	HAMP domain-containing sensor histidine kinase	-
S101359_RS02140 (S101359_00421)	rapC	437614..438762 (+)	1149	WP_004430265.1	tetratricopeptide repeat protein	Regulator
S101359_RS02145 (S101359_00422)	phrC	438746..438865 (+)	120	WP_004430266.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
S101359_RS02150	-	438999..439106 (-)	108	WP_072053240.1	YjcZ family sporulation protein	-
S101359_RS02155	-	439310..439417 (-)	108	WP_035192051.1	YjcZ family sporulation protein	-
S101359_RS02160 (S101359_00423)	-	439524..440888 (-)	1365	WP_088116506.1	aspartate kinase	-
S101359_RS02165 (S101359_00424)	ceuB	441321..442271 (+)	951	WP_010789705.1	ABC transporter permease	Machinery gene
S101359_RS02170 (S101359_00425)	-	442264..443211 (+)	948	WP_010789704.1	iron chelate uptake ABC transporter family permease subunit	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45756.03 Da
• Isoelectric Point: 4.8173

>NTDB_id=231262 S101359_RS02140 WP_004430265.1 437614..438762(+) (rapC) [Bacillus atrophaeus strain SRCM101359]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=231262 S101359_RS02140 WP_004430265.1 437614..438762(+) (rapC) [Bacillus atrophaeus strain SRCM101359]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCTGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACTTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATATGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGCCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCCCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_1) (224-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	85.079	100	0.851
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571