Detailed information NTG0230672

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CCK83_RS07615
• Genome accession: NZ_CP021428
• Coordinates: 1587578..1588990 (-)
• Length: 470 a.a.
• NCBI ID: WP_005804053.1
• Uniprot ID: A0A009MIS7
• Organism: Acinetobacter pittii strain HUMV-6483
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 1582578..1593990

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCK83_RS07600	lptG	1583630..1584700 (+)	1071	WP_002121203.1	LPS export ABC transporter permease LptG	-
CCK83_RS07605	gpmI	1584827..1586374 (+)	1548	WP_005804050.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
CCK83_RS07610	ctpA	1586390..1587574 (+)	1185	WP_002121269.1	S41 family peptidase	-
CCK83_RS07615	pilR	1587578..1588990 (-)	1413	WP_005804053.1	sigma-54-dependent transcriptional regulator	Regulator
CCK83_RS07620	pilS	1589014..1590582 (-)	1569	WP_005804055.1	sensor histidine kinase	Regulator
CCK83_RS07625	gacA	1590593..1591228 (-)	636	WP_002121174.1	response regulator	-
CCK83_RS07630	pbpG	1591441..1592487 (+)	1047	WP_005804058.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
CCK83_RS07635	thrC	1592595..1593734 (-)	1140	WP_002048893.1	threonine synthase	-

Sequence

Protein

• Length: 470 a.a.
• Molecular weight: 52636.68 Da
• Isoelectric Point: 6.2765

>NTDB_id=230672 CCK83_RS07615 WP_005804053.1 1587578..1588990(-) (pilR) [Acinetobacter pittii strain HUMV-6483]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVQHVSQTYPYTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKPEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLIHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVQQGKFRQDLFFRIHVMDIMLPPLRDRGGDILL
LANHFIQKVCTEWGISSKQLTASAETYLLQQDFPGNVRELRNMIERAITLSDDESIDLTHLAPPLRGSSVSPQIVTKQLN
QTPAVQTHPKFPMEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV

Nucleotide

• Length: 1413 bp

>NTDB_id=230672 CCK83_RS07615 WP_005804053.1 1587578..1588990(-) (pilR) [Acinetobacter pittii strain HUMV-6483]
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAGCTTTTTACTCAGTTTCATTACGATGCATGCT
TGACCGATTTAAATCTACCTGACGGTAGTGGTTTAGAATTGGTTCAACATGTTTCTCAAACTTACCCATACACTCCCATT
GCAGTCTTAACTGCATACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCGGGAGCTTTTGATTTTGTCAGCAAACC
TATTAACCAAATTCACTTAGATCAATTGTTAAAAAAGGCGCTCAACCAGCCAAAACCAGAGCATGAGTTCGGTGAAACAA
CATTAGAAAATGACTTATTAATTGGGCGTTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCTCCTGTATTTGTTACAGGCGAGTCTGGTACGGGTAAAGAAGTTGTTGCTAATCTGATTCACCGATTAAGCAACCG
CAGTGAAGGACCATTTATTGCAATTAACTGTGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGGAGCTTTACTGGCGCGACTCAAGATAAACAAGGTCTTATTTTATCAGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCTTTAAGTATGCAAGTTAAATTGCTTCGGGCAGTACAAGAGAAAAAGATTCGCCCTGTAGGTTCAGA
TCAGGAAATTGATGTTGATTTTCGAGTAATCAGTGCCAGTCACCAAGACTTAGATTTATTAGTTCAACAAGGTAAATTCC
GTCAGGACTTATTTTTCCGTATTCATGTTATGGATATTATGTTGCCGCCACTACGTGACCGTGGTGGAGATATTTTGCTA
TTGGCCAATCATTTTATTCAAAAGGTTTGTACGGAATGGGGAATTTCAAGCAAGCAATTAACGGCGAGCGCTGAGACTTA
CTTATTGCAGCAAGACTTCCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAACGGGCTATTACTTTAAGTGATGATG
AGTCCATTGATTTAACACACTTAGCGCCTCCTCTTAGAGGCAGTAGCGTGAGCCCGCAAATCGTAACGAAACAACTAAAT
CAAACACCGGCTGTTCAGACTCACCCAAAATTTCCAATGGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGATAT
TTTACTGAATGCTCTGAACATGACGCATTGGAATCGAACTTTAGCGGCTAAAAAGTTAGGAATGACATTCCGTTCTTTAC
GCTATCGACTAAAAAAGTTTGGCTTAGATACTGAAATGGGAGAGGAAGTATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (420-460)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A009MIS7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	86.047	100	0.866
pilR	Pseudomonas aeruginosa PAK	51.096	97.021	0.496