Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CSB94_RS06025 | Genome accession | NZ_CP027166 |
| Coordinates | 1218957..1219322 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain AR_0357 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1213957..1224322
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB94_RS06010 (CSB94_1217) | pilK | 1215301..1216176 (-) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
| CSB94_RS06015 (CSB94_1218) | pilJ | 1216237..1218285 (-) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CSB94_RS06020 (CSB94_1219) | - | 1218370..1218906 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CSB94_RS06025 (CSB94_1220) | pilH | 1218957..1219322 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CSB94_RS06030 (CSB94_1221) | pilG | 1219369..1219776 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| CSB94_RS06035 (CSB94_1222) | gshB | 1220031..1220984 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| CSB94_RS06040 (CSB94_1223) | - | 1221131..1222024 (+) | 894 | WP_003084580.1 | TonB family protein | - |
| CSB94_RS06045 (CSB94_1224) | - | 1222073..1222642 (+) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| CSB94_RS06050 (CSB94_1225) | ruvX | 1222642..1223076 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CSB94_RS06055 (CSB94_1226) | pyrR | 1223188..1223700 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=230673 CSB94_RS06025 WP_003084587.1 1218957..1219322(-) (pilH) [Pseudomonas aeruginosa strain AR_0357]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=230673 CSB94_RS06025 WP_003084587.1 1218957..1219322(-) (pilH) [Pseudomonas aeruginosa strain AR_0357]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |