Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CCK83_RS02975 Genome accession   NZ_CP021428
Coordinates   637119..637502 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain HUMV-6483     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 632119..642502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CCK83_RS02960 pilJ 634016..636094 (-) 2079 WP_032052669.1 methyl-accepting chemotaxis protein -
  CCK83_RS02965 pilI 636137..636673 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  CCK83_RS02970 pilH 636734..637096 (-) 363 WP_002116220.1 response regulator -
  CCK83_RS02975 pilG 637119..637502 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  CCK83_RS02980 - 637786..638424 (+) 639 WP_032052668.1 hypothetical protein -
  CCK83_RS02985 nolF 638493..639602 (+) 1110 WP_080973437.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=230651 CCK83_RS02975 WP_000389061.1 637119..637502(-) (pilG) [Acinetobacter pittii strain HUMV-6483]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=230651 CCK83_RS02975 WP_000389061.1 637119..637502(-) (pilG) [Acinetobacter pittii strain HUMV-6483]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTCATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment