Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | CBL09_RS01600 | Genome accession | NZ_CP021326 |
| Coordinates | 339812..340285 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214061.1 | Uniprot ID | A0A219CC01 |
| Organism | Acinetobacter baumannii strain XH386 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 334812..345285
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CBL09_RS01575 (CBL09_01560) | - | 335276..337381 (-) | 2106 | WP_001117590.1 | RelA/SpoT family protein | - |
| CBL09_RS01580 | - | 337421..337550 (-) | 130 | Protein_299 | hypothetical protein | - |
| CBL09_RS01585 (CBL09_01565) | rpoZ | 337589..337867 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| CBL09_RS01590 (CBL09_01570) | gmk | 337940..338569 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| CBL09_RS01595 (CBL09_01575) | ispH | 338692..339642 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| CBL09_RS01600 (CBL09_01580) | fimU | 339812..340285 (+) | 474 | WP_001214061.1 | pilus assembly FimT family protein | Machinery gene |
| CBL09_RS01605 (CBL09_01585) | pilV | 340279..340839 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| CBL09_RS01610 (CBL09_01590) | pilW | 340840..341841 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| CBL09_RS01615 (CBL09_01595) | pilX | 341838..342656 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16836.40 Da Isoelectric Point: 8.5355
>NTDB_id=229888 CBL09_RS01600 WP_001214061.1 339812..340285(+) (fimU) [Acinetobacter baumannii strain XH386]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=229888 CBL09_RS01600 WP_001214061.1 339812..340285(+) (fimU) [Acinetobacter baumannii strain XH386]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGTCCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
98.726 |
100 |
0.987 |