Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   C5L38_RS18900 Genome accession   NZ_CP027022
Coordinates   4127043..4128167 (-) Length   374 a.a.
NCBI ID   WP_030219534.1    Uniprot ID   A0ABW8CPZ2
Organism   Streptomyces sp. WAC00288     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4122043..4133167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5L38_RS18875 (C5L38_18880) - 4122425..4123228 (-) 804 WP_234363791.1 hypothetical protein -
  C5L38_RS18880 (C5L38_18885) - 4123216..4123788 (-) 573 WP_062754441.1 SigE family RNA polymerase sigma factor -
  C5L38_RS18885 (C5L38_18890) - 4123948..4124883 (-) 936 WP_062754443.1 A/G-specific adenine glycosylase -
  C5L38_RS18890 (C5L38_18895) - 4125301..4125915 (-) 615 Protein_3735 phosphatase PAP2 family protein -
  C5L38_RS18895 (C5L38_18900) - 4126139..4126996 (+) 858 WP_079131149.1 hypothetical protein -
  C5L38_RS18900 (C5L38_18905) disA 4127043..4128167 (-) 1125 WP_030219534.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  C5L38_RS18905 (C5L38_18910) radA/sms 4128555..4129958 (-) 1404 WP_062754447.1 DNA repair protein RadA Machinery gene
  C5L38_RS18910 (C5L38_18915) - 4130136..4131917 (+) 1782 WP_062754449.1 sigma-70 family RNA polymerase sigma factor -
  C5L38_RS18915 (C5L38_18920) - 4131939..4132799 (-) 861 WP_062754451.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40129.02 Da        Isoelectric Point: 5.2237

>NTDB_id=229890 C5L38_RS18900 WP_030219534.1 4127043..4128167(-) (disA) [Streptomyces sp. WAC00288]
MAAKDGAAAPGKSGAGSGSDALMRAALSAVAPGTALRDGLERILRGNTGGLIVLGLDKAVDSMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDITKIHRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVHGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVIRDYVPEPTAKRSRTVAEALTELDALTHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=229890 C5L38_RS18900 WP_030219534.1 4127043..4128167(-) (disA) [Streptomyces sp. WAC00288]
TTGGCAGCCAAGGACGGGGCAGCAGCTCCCGGGAAGTCCGGCGCGGGCTCCGGCAGTGACGCGCTGATGCGGGCCGCTCT
GAGCGCGGTCGCGCCGGGTACCGCCCTGCGCGACGGCCTGGAGCGGATCCTCCGGGGAAACACGGGCGGGCTCATCGTGC
TCGGCCTGGACAAAGCGGTCGATTCGATGTGCACCGGCGGCTTCGTGCTGGACGTCGAGTTCACGGCCACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCGTCCTCGACAAGGACATCACCAAGATCCACCGGGCGGGCGTCCAGCTGGTCCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCCGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGCACGGCGAGCGCCGGGTCCTGGAGGAGTCGGCCGCG
ATCCTGTCCCGCGCCAACCAGGCGCTCGCGACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTGGCGGGCACGCTCTC
GGCCCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCACCGCCGTCGCGCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGGCGCCTCCTCTCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGCTCGCGGACGGTCGCGGA
GGCGCTCACCGAGCTGGACGCGCTCACCCACACCGAGCTGCTCGAACTCCCGGTCGTGGCGCGGGCCCTGGGCTACAGCG
GCTCGCCCGAGACCCTCGACTCGGCCGTCTCGCCGCGCGGCTACCGGCTCCTCGCGAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGAGCGGCTCGTGGAGCACTTCGGCGGGCTGCAGAAGCTCCTCGCGGCCAGCGTCGACGACCTCCAGGCCGTCGA
CGGCGTCGGCGAGGCCCGTGCCCGCAGCGTCCGCGAGGGCCTGTCCCGGCTCGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433


Multiple sequence alignment