Detailed information NTG0229700

Bioinformatically predicted

Overview

• Name: fimT
• Type: Machinery gene
• Locus tag: CA919_RS03585
• Genome accession: NZ_CP021286
• Coordinates: 739765..740472 (-)
• Length: 235 a.a.
• NCBI ID: WP_010946369.1
• Uniprot ID: Q5ZXU9
• Organism: Legionella pneumophila subsp. pneumophila strain Albuquerque
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 734765..745472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA919_RS03570	-	737640..738152 (-)	513	WP_010946366.1	pilus assembly protein	-
CA919_RS03575	-	738149..739216 (-)	1068	WP_010946367.1	PilW family protein	-
CA919_RS03580	pilV	739213..739752 (-)	540	WP_010946368.1	type IV pilus modification protein PilV	-
CA919_RS03585	fimT	739765..740472 (-)	708	WP_010946369.1	GspH/FimT family pseudopilin	Machinery gene
CA919_RS03590	-	740694..741554 (-)	861	WP_011213225.1	polysaccharide deacetylase family protein	-
CA919_RS03595	-	741731..743080 (-)	1350	WP_010946371.1	lpg0634 family Dot/Icm T4SS effector	-
CA919_RS03600	-	743368..744849 (+)	1482	WP_010946372.1	phospholipid carrier-dependent glycosyltransferase	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 24868.47 Da
• Isoelectric Point: 7.0384

>NTDB_id=229700 CA919_RS03585 WP_010946369.1 739765..740472(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Albuquerque]
MNKVITESQKFTLRNIANMLFCVESSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP

Nucleotide

• Length: 708 bp

>NTDB_id=229700 CA919_RS03585 WP_010946369.1 739765..740472(-) (fimT) [Legionella pneumophila subsp. pneumophila strain Albuquerque]
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCTGCGCAACATAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
GTTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTTTGAACTGCCCTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (67-88)

• Type II transport protein GspH (GspH) (106-208)

3D structure

• AlphaFold DB: Q5ZXU9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimT	Legionella pneumophila strain Lp02	100	100	1