Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   CA921_RS04345 Genome accession   NZ_CP021283
Coordinates   957670..957987 (+) Length   105 a.a.
NCBI ID   WP_027227528.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pneumophila strain Allentown     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 952670..962987
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CA921_RS04325 - 952822..954261 (+) 1440 WP_060871583.1 cation:proton antiporter -
  CA921_RS04330 nadC 954258..955100 (+) 843 WP_014841212.1 carboxylating nicotinate-nucleotide diphosphorylase -
  CA921_RS04335 - 955097..956188 (+) 1092 WP_027227527.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase -
  CA921_RS04340 - 956163..957578 (+) 1416 WP_010946545.1 M20 family metallopeptidase -
  CA921_RS04345 comEA 957670..957987 (+) 318 WP_027227528.1 ComEA family DNA-binding protein Machinery gene
  CA921_RS04350 - 958183..959220 (+) 1038 WP_011213320.1 rod shape-determining protein -
  CA921_RS04355 mreC 959198..960106 (+) 909 WP_010946548.1 rod shape-determining protein MreC -
  CA921_RS04360 mreD 960103..960582 (+) 480 WP_027220897.1 rod shape-determining protein MreD -
  CA921_RS04365 - 960518..961120 (-) 603 WP_027227529.1 pseudouridine synthase -
  CA921_RS04370 - 961381..962079 (+) 699 WP_027225210.1 hypothetical protein -

Sequence

Protein


Download         Length: 105 a.a.        Molecular weight: 11690.69 Da        Isoelectric Point: 10.6194

>NTDB_id=229659 CA921_RS04345 WP_027227528.1 957670..957987(+) (comEA) [Legionella pneumophila subsp. pneumophila strain Allentown]
MKARLIAILLSIIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVNSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN

Nucleotide


Download         Length: 318 bp        

>NTDB_id=229659 CA921_RS04345 WP_027227528.1 957670..957987(+) (comEA) [Legionella pneumophila subsp. pneumophila strain Allentown]
ATGAAAGCAAGACTCATTGCTATTTTGTTATCAATTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTTAATACAGCAGATGTTAATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGGTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(37-98)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Legionella pneumophila str. Paris

98.095

100

0.981
  comEA Legionella pneumophila strain ERS1305867

98.095

100

0.981
  comEA Staphylococcus aureus N315

38.384

94.286

0.362
  comEA Staphylococcus aureus MW2

38.384

94.286

0.362

Multiple sequence alignment