Detailed information NTG0229316

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CA928_RS13550
• Genome accession: NZ_CP021264
• Coordinates: 3009882..3010967 (+)
• Length: 361 a.a.
• NCBI ID: WP_027229117.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. fraseri strain D-5387
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3004882..3015967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA928_RS13525	-	3005275..3006024 (-)	750	WP_027229122.1	CPBP family glutamic-type intramembrane protease	-
CA928_RS13530	rsmB	3006021..3007304 (-)	1284	WP_027229121.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
CA928_RS13535	fmt	3007301..3008245 (-)	945	WP_027229120.1	methionyl-tRNA formyltransferase	-
CA928_RS13540	def	3008242..3008754 (-)	513	WP_027229119.1	peptide deformylase	-
CA928_RS13545	-	3008848..3009885 (+)	1038	WP_027229118.1	LysM domain-containing protein	-
CA928_RS13550	dprA	3009882..3010967 (+)	1086	WP_027229117.1	DNA-processing protein DprA	Machinery gene
CA928_RS13555	-	3010957..3011394 (+)	438	WP_027229116.1	DUF494 family protein	-
CA928_RS13560	topA	3011474..3013753 (+)	2280	WP_027229115.1	type I DNA topoisomerase	-
CA928_RS13565	-	3013847..3015820 (-)	1974	WP_027229114.1	acyltransferase family protein	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39398.59 Da
• Isoelectric Point: 7.2231

>NTDB_id=229316 CA928_RS13550 WP_027229117.1 3009882..3010967(+) (dprA) [Legionella pneumophila subsp. fraseri strain D-5387]
MSNLQPLLALNRMKKISPRTVLKLQKRWPDLNLMFQLSSAELEQAGIPPLLAQTIKNFDQDFIKADLDWLNSSENHHIVT
WDSPYYPALLKEIADPPFILYAKGELSALTQTSLAIVGSRNSSVTGNENARAFSSEISRYGVTIVSGLALGIDAHAHLGC
LEAGGKTIAVLGTGIDCVYPRRHLKLAEQITENGLLLSEFPLKSPPIAGHFPLRNRIISGLSLCILVIEAAIKSGSLITA
RMAVEQNRDVLAIPGSIHNPLARGCHHLLQQGAKLVTSVTDVLDELKIEYHQIASNKPIFSLASGKENLVKFIGFETTAI
DQIIVRSGYSMEQVTSGLAELELKGAVMAVPGGYIRCEYER

Nucleotide

• Length: 1086 bp

>NTDB_id=229316 CA928_RS13550 WP_027229117.1 3009882..3010967(+) (dprA) [Legionella pneumophila subsp. fraseri strain D-5387]
ATGAGTAATCTGCAACCCCTCCTCGCCTTAAACAGGATGAAAAAAATTAGCCCCAGGACTGTATTAAAACTACAAAAAAG
ATGGCCTGATTTAAATCTTATGTTTCAACTGTCCAGTGCTGAACTGGAACAAGCCGGCATACCACCTTTACTGGCACAAA
CCATAAAAAATTTTGACCAGGACTTTATAAAAGCTGATTTGGACTGGCTCAATTCATCAGAAAATCATCATATTGTAACT
TGGGACTCCCCCTATTATCCTGCATTACTCAAAGAAATCGCAGATCCTCCCTTTATTTTATATGCAAAAGGCGAACTTTC
TGCTTTGACACAAACTAGTCTGGCAATTGTTGGAAGTCGTAATTCTTCTGTGACAGGGAATGAAAATGCTCGGGCATTCT
CCAGTGAGATTTCCAGGTATGGGGTAACCATAGTGAGTGGTTTGGCCCTAGGAATTGATGCCCATGCCCATTTAGGTTGT
CTGGAAGCAGGTGGCAAAACAATAGCGGTTTTAGGTACCGGAATTGATTGCGTCTATCCGCGTCGACATTTAAAATTGGC
GGAGCAAATTACCGAGAATGGCTTATTATTAAGTGAATTTCCTTTAAAAAGTCCGCCAATCGCTGGACATTTTCCACTCA
GAAATCGTATAATAAGCGGTCTATCATTATGCATTTTGGTTATCGAGGCGGCAATTAAAAGCGGTTCTTTAATTACAGCG
AGAATGGCTGTGGAACAAAACAGAGATGTATTGGCTATTCCCGGTTCGATTCATAACCCGTTAGCCAGGGGCTGCCACCA
CTTATTGCAACAAGGTGCAAAATTAGTAACCTCAGTGACTGATGTTCTCGATGAGCTAAAAATAGAGTACCATCAGATCG
CTTCTAATAAACCAATTTTTTCCCTTGCCAGCGGTAAGGAAAACCTAGTAAAGTTCATTGGTTTTGAAACTACGGCTATA
GATCAAATCATTGTTCGTAGCGGATATAGCATGGAACAAGTCACGAGTGGACTGGCTGAACTAGAATTGAAAGGGGCTGT
TATGGCAGTTCCCGGTGGCTATATAAGGTGTGAATATGAAAGATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (299-353)

• DNA recombination-mediator protein A (DNA_processg_A) (74-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	91.413	100	0.914
dprA	Vibrio campbellii strain DS40M4	46.201	91.136	0.421
dprA	Vibrio cholerae strain A1552	47.667	83.102	0.396
dprA	Glaesserella parasuis strain SC1401	38.133	100	0.396