Detailed information NTG0229315

Bioinformatically predicted

Overview

• Name: lqsT
• Type: Regulator
• Locus tag: CA928_RS12610
• Genome accession: NZ_CP021264
• Coordinates: 2814083..2815345 (+)
• Length: 420 a.a.
• NCBI ID: WP_027228479.1
• Uniprot ID: A0A2S6EWA5
• Organism: Legionella pneumophila subsp. fraseri strain D-5387
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2809083..2820345

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CA928_RS12600	ceg32	2809957..2812785 (+)	2829	WP_027228481.1	Dot/Icm T4SS effector Ceg32/SidI	-
CA928_RS12605	mesI	2812787..2813677 (+)	891	WP_080272257.1	Dot/Icm T4SS effector metaeffector MesI	-
CA928_RS12610	lqsT	2814083..2815345 (+)	1263	WP_027228479.1	HAMP domain-containing sensor histidine kinase	Regulator
CA928_RS12615	-	2815393..2816088 (-)	696	WP_027228478.1	iron-containing redox enzyme family protein	-
CA928_RS12620	-	2816426..2818849 (-)	2424	WP_027228477.1	SidJ family T4SS effector polyglutamylation protein	-
CA928_RS12625	-	2818921..2820114 (-)	1194	WP_080272262.1	SidE phosphodiesterase domain-containing protein	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 48574.02 Da
• Isoelectric Point: 7.9660

>NTDB_id=229315 CA928_RS12610 WP_027228479.1 2814083..2815345(+) (lqsT) [Legionella pneumophila subsp. fraseri strain D-5387]
MQRLKNIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPRPLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALILLVSGVGLAFFHFYILSNNLFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETNKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide

• Length: 1263 bp

>NTDB_id=229315 CA928_RS12610 WP_027228479.1 2814083..2815345(+) (lqsT) [Legionella pneumophila subsp. fraseri strain D-5387]
ATGCAAAGGTTAAAAAATATATTTACTGCAATTTACCAATACTTATTAAAAGAAACTGAAGACGCAAGCCATCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAACATTTTCAACTGACAGAAG
AGTTTATTTTACGTATCACCGCGGCTCTCCTCTGCGCCTGTTTGGCATTTAATCAATTTTGGCCAAGACCATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTGCTCTTTTGTTTGCCTTATTTTTTTGCTTATTTGACCCTCATAAATAATGG
TTCGACCCTTTGGTTAATGAATTGCGTATCAGCTATCTTTTTTCTTTTATTAGTTTCCAGTGTATTGGGAGCTCTTATAT
TACTTGTATCAGGTGTTGGGCTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCTGTTTGTCTATATCCCGGGAACT
ATATCTCTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATCATCATTGGCGCCTTGTTTGCACGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCAGGTATGCGTATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCACTTGCCAGTATTT
ATTTACAGGCTGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGTGGCATAGAAATGAGTAATCAATTAATTCGCATGCAACTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTACTCCATCAAAAAATTGCTCAAAGCGTCTTTAGAAGAATACCCTTTCAAAGAAAACCAAA
AATCTTTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGTTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCAATAAAGGGGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTTCATATAAAGGATACCGCTAAAGGCTTAAATCATAAAGAATATGAAAAAATTTTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGGACTGGTTTAGGCTTAGCCTATTGTAAACTTCTGATGCAAGCAGCAGGTGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTTCCCAAAATTGATTAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (310-417)

• His Kinase A (phospho-acceptor) domain (HisKA) (198-255)

3D structure

• AlphaFold DB: A0A2S6EWA5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
lqsT	Legionella pneumophila subsp. pneumophila str. Philadelphia 1	99.048	100	0.99