Detailed information
Bioinformatically predicted
Overview
| Name | lytF | Type | Regulator |
| Locus tag | SAG_RS11380 | Genome accession | NC_004116 |
| Coordinates | 1756874..1757383 (-) | Length | 169 a.a. |
| NCBI ID | WP_000392200.1 | Uniprot ID | Q8DXT4 |
| Organism | Streptococcus agalactiae 2603V/R | ||
| Function | cell lysis (predicted from homology) Cell lysis |
||
Genomic Context
Location: 1751874..1762383
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAG_RS11355 (SAG1757) | tsaD | 1752387..1753397 (-) | 1011 | WP_000655087.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| SAG_RS11360 (SAG1758) | rimI | 1753473..1753880 (-) | 408 | WP_000445945.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| SAG_RS11365 (SAG1759) | tsaB | 1753882..1754574 (-) | 693 | WP_000978604.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| SAG_RS11370 (SAG1760) | - | 1754753..1754983 (+) | 231 | WP_000639570.1 | DNA-dependent RNA polymerase subunit epsilon | - |
| SAG_RS11375 (SAG1761) | rnjA | 1755037..1756716 (+) | 1680 | WP_000065498.1 | ribonuclease J1 | - |
| SAG_RS11380 (SAG1762) | lytF | 1756874..1757383 (-) | 510 | WP_000392200.1 | CHAP domain-containing protein | Regulator |
| SAG_RS11385 (SAG1763) | glnA | 1757531..1758877 (-) | 1347 | WP_000156226.1 | type I glutamate--ammonia ligase | - |
| SAG_RS11390 (SAG1764) | - | 1758911..1759282 (-) | 372 | WP_000664338.1 | MerR family transcriptional regulator | - |
| SAG_RS11395 (SAG1765) | - | 1759362..1759901 (-) | 540 | WP_000854121.1 | FUSC family protein | - |
| SAG_RS11400 (SAG1766) | - | 1760164..1761360 (-) | 1197 | WP_001096753.1 | phosphoglycerate kinase | - |
| SAG_RS11405 (SAG1767) | - | 1761495..1762364 (-) | 870 | WP_000858929.1 | 5'-nucleotidase, lipoprotein e(P4) family | - |
Sequence
Protein
Download Length: 169 a.a. Molecular weight: 18390.30 Da Isoelectric Point: 4.3039
>NTDB_id=22920 SAG_RS11380 WP_000392200.1 1756874..1757383(-) (lytF) [Streptococcus agalactiae 2603V/R]
MEENMNIKQLKSKTMLGTVALVSAFSFASTNADANTYNYAVDVDYLASAEEIAQAHPASNTFPLGQCTWGVKEMATWAGN
WWGNGGDWAASAASADYTVGTQPRVGSIVCWTDGSYGHVAYVTAVDPVTNKIQVLESNYAGHQWIDNYRGWFDPQNTVTP
GVVSYIYPN
MEENMNIKQLKSKTMLGTVALVSAFSFASTNADANTYNYAVDVDYLASAEEIAQAHPASNTFPLGQCTWGVKEMATWAGN
WWGNGGDWAASAASADYTVGTQPRVGSIVCWTDGSYGHVAYVTAVDPVTNKIQVLESNYAGHQWIDNYRGWFDPQNTVTP
GVVSYIYPN
Nucleotide
Download Length: 510 bp
>NTDB_id=22920 SAG_RS11380 WP_000392200.1 1756874..1757383(-) (lytF) [Streptococcus agalactiae 2603V/R]
ATGGAGGAAAACATGAACATAAAACAATTAAAGTCTAAAACAATGCTTGGAACAGTGGCTTTGGTGTCCGCTTTTTCATT
TGCTTCAACAAATGCAGATGCGAATACATATAACTATGCAGTAGATGTAGACTACCTAGCAAGTGCGGAGGAAATTGCTC
AAGCACATCCAGCTAGTAATACGTTTCCACTAGGTCAATGCACATGGGGTGTAAAGGAGATGGCAACATGGGCAGGTAAC
TGGTGGGGAAACGGTGGTGATTGGGCTGCGAGCGCCGCATCAGCTGATTATACAGTAGGGACACAACCGCGCGTGGGTTC
TATCGTATGTTGGACTGATGGTAGTTATGGACATGTGGCTTATGTTACAGCTGTAGATCCTGTCACTAATAAAATTCAGG
TTTTAGAATCTAATTATGCAGGTCATCAATGGATTGATAATTATCGTGGTTGGTTTGATCCACAAAATACAGTAACACCA
GGGGTAGTTAGCTACATTTATCCGAATTAA
ATGGAGGAAAACATGAACATAAAACAATTAAAGTCTAAAACAATGCTTGGAACAGTGGCTTTGGTGTCCGCTTTTTCATT
TGCTTCAACAAATGCAGATGCGAATACATATAACTATGCAGTAGATGTAGACTACCTAGCAAGTGCGGAGGAAATTGCTC
AAGCACATCCAGCTAGTAATACGTTTCCACTAGGTCAATGCACATGGGGTGTAAAGGAGATGGCAACATGGGCAGGTAAC
TGGTGGGGAAACGGTGGTGATTGGGCTGCGAGCGCCGCATCAGCTGATTATACAGTAGGGACACAACCGCGCGTGGGTTC
TATCGTATGTTGGACTGATGGTAGTTATGGACATGTGGCTTATGTTACAGCTGTAGATCCTGTCACTAATAAAATTCAGG
TTTTAGAATCTAATTATGCAGGTCATCAATGGATTGATAATTATCGTGGTTGGTTTGATCCACAAAATACAGTAACACCA
GGGGTAGTTAGCTACATTTATCCGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lytF | Streptococcus gordonii strain NCTC7865 |
56.818 |
78.107 |
0.444 |
| lytF | Streptococcus gordonii str. Challis substr. CH1 |
56.818 |
78.107 |
0.444 |
| SMU.836 | Streptococcus mutans UA159 |
54.331 |
75.148 |
0.408 |