Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CA935_RS04490 | Genome accession | NZ_CP021258 |
| Coordinates | 1007126..1007443 (+) | Length | 105 a.a. |
| NCBI ID | WP_027220896.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. fraseri strain D-5744 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1002126..1012443
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA935_RS04470 | - | 1002278..1003717 (+) | 1440 | WP_027220894.1 | cation:proton antiporter | - |
| CA935_RS04475 | nadC | 1003714..1004556 (+) | 843 | WP_106143024.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| CA935_RS04480 | - | 1004553..1005644 (+) | 1092 | WP_010946544.1 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | - |
| CA935_RS04485 | - | 1005619..1007034 (+) | 1416 | WP_027220895.1 | M20 family metallopeptidase | - |
| CA935_RS04490 | comEA | 1007126..1007443 (+) | 318 | WP_027220896.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| CA935_RS04495 | - | 1007639..1008676 (+) | 1038 | WP_011213320.1 | rod shape-determining protein | - |
| CA935_RS04500 | mreC | 1008654..1009562 (+) | 909 | WP_010946548.1 | rod shape-determining protein MreC | - |
| CA935_RS04505 | mreD | 1009559..1010038 (+) | 480 | WP_027220897.1 | rod shape-determining protein MreD | - |
| CA935_RS04510 | - | 1009974..1010576 (-) | 603 | WP_027220898.1 | pseudouridine synthase | - |
| CA935_RS04515 | - | 1010837..1011535 (+) | 699 | WP_027220899.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11739.76 Da Isoelectric Point: 10.5233
>NTDB_id=229120 CA935_RS04490 WP_027220896.1 1007126..1007443(+) (comEA) [Legionella pneumophila subsp. fraseri strain D-5744]
MKARLIAILLSIIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVYSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
MKARLIAILLSIIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVYSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
Nucleotide
Download Length: 318 bp
>NTDB_id=229120 CA935_RS04490 WP_027220896.1 1007126..1007443(+) (comEA) [Legionella pneumophila subsp. fraseri strain D-5744]
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCAATTATAGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTTAATACAGCGGATGTGTATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGGTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCAATTATAGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTTAATACAGCGGATGTGTATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGGTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Legionella pneumophila str. Paris |
99.048 |
100 |
0.99 |
| comEA | Legionella pneumophila strain ERS1305867 |
99.048 |
100 |
0.99 |
| comEA | Staphylococcus aureus N315 |
38.384 |
94.286 |
0.362 |
| comEA | Staphylococcus aureus MW2 |
38.384 |
94.286 |
0.362 |