Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | MTAI_RS11865 | Genome accession | NZ_CP021130 |
| Coordinates | 2413689..2414354 (+) | Length | 221 a.a. |
| NCBI ID | WP_027887067.1 | Uniprot ID | A0A399DW19 |
| Organism | Meiothermus taiwanensis WR-220 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2408689..2419354
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MTAI_RS11850 (Mtai_v1c23380) | - | 2409600..2411063 (+) | 1464 | WP_036197546.1 | lyase family protein | - |
| MTAI_RS11855 (Mtai_v1c23390) | - | 2411363..2412370 (+) | 1008 | WP_027888850.1 | isocitrate/isopropylmalate dehydrogenase family protein | - |
| MTAI_RS11860 (Mtai_v1c23400) | pilM | 2412560..2413696 (+) | 1137 | WP_043983346.1 | type IV pilus assembly protein PilM | Machinery gene |
| MTAI_RS11865 (Mtai_v1c23410) | pilN | 2413689..2414354 (+) | 666 | WP_027887067.1 | hypothetical protein | Machinery gene |
| MTAI_RS11870 (Mtai_v1c23420) | pilO | 2414335..2414952 (+) | 618 | WP_245392042.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| MTAI_RS11875 (Mtai_v1c23430) | - | 2414949..2415587 (+) | 639 | WP_245453116.1 | hypothetical protein | - |
| MTAI_RS11880 (Mtai_v1c23440) | - | 2415591..2416397 (+) | 807 | WP_119342530.1 | IS5 family transposase | - |
| MTAI_RS11885 (Mtai_v1c23450) | - | 2416440..2416844 (+) | 405 | WP_245453117.1 | hypothetical protein | - |
| MTAI_RS11890 (Mtai_v1c23460) | - | 2416854..2418377 (+) | 1524 | WP_027887064.1 | secretin N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 24828.26 Da Isoelectric Point: 10.5078
>NTDB_id=228454 MTAI_RS11865 WP_027887067.1 2413689..2414354(+) (pilN) [Meiothermus taiwanensis WR-220]
MIKLNLLPKNLRRRVEPGWWRLAAVAVVLAVLGTVAFLHLSTLSRVQALENQRDQLQVEVDVLRPFIAEQNRLNQQQREL
EQLLAVRNQLRERFVPWSDNLALVINQIPREGRRFGVALRSIGTKLLTPQEVQSNVQNGLYDGKPVNVEFNLQGEAIGQN
ALIRFVEAFETSPRFGINFQSASLDQQRQLYTFGATIGLIRPTSETASNTSGGEDSGSPSR
MIKLNLLPKNLRRRVEPGWWRLAAVAVVLAVLGTVAFLHLSTLSRVQALENQRDQLQVEVDVLRPFIAEQNRLNQQQREL
EQLLAVRNQLRERFVPWSDNLALVINQIPREGRRFGVALRSIGTKLLTPQEVQSNVQNGLYDGKPVNVEFNLQGEAIGQN
ALIRFVEAFETSPRFGINFQSASLDQQRQLYTFGATIGLIRPTSETASNTSGGEDSGSPSR
Nucleotide
Download Length: 666 bp
>NTDB_id=228454 MTAI_RS11865 WP_027887067.1 2413689..2414354(+) (pilN) [Meiothermus taiwanensis WR-220]
TTGATTAAACTCAACCTCCTGCCCAAGAACCTGCGCCGTCGGGTTGAGCCCGGCTGGTGGCGCCTGGCCGCTGTGGCGGT
GGTGCTCGCGGTGCTGGGGACGGTGGCCTTTCTCCATCTCTCTACGCTCTCACGGGTTCAGGCACTGGAGAACCAGCGCG
ACCAGCTCCAAGTAGAGGTGGATGTGCTACGCCCCTTCATCGCCGAGCAAAACCGCCTCAATCAACAACAGCGCGAGCTC
GAGCAGCTCCTGGCCGTGCGCAACCAACTGCGCGAACGCTTCGTGCCCTGGTCGGATAATCTGGCCCTGGTCATCAATCA
GATTCCACGGGAAGGCCGCCGGTTTGGGGTGGCCCTGCGCAGCATCGGCACCAAGCTTCTCACACCCCAAGAAGTGCAAA
GCAACGTACAGAACGGTCTATACGACGGCAAACCGGTCAACGTGGAATTCAACCTCCAGGGCGAAGCCATCGGCCAGAAC
GCCCTGATTCGCTTCGTTGAGGCCTTCGAGACCTCACCGCGCTTCGGCATTAACTTCCAAAGCGCCAGCCTCGATCAGCA
ACGGCAGCTTTACACCTTTGGGGCCACCATCGGCCTGATTCGGCCAACCTCGGAGACGGCCAGCAACACATCGGGAGGTG
AAGATAGTGGTAGCCCTTCTCGCTAG
TTGATTAAACTCAACCTCCTGCCCAAGAACCTGCGCCGTCGGGTTGAGCCCGGCTGGTGGCGCCTGGCCGCTGTGGCGGT
GGTGCTCGCGGTGCTGGGGACGGTGGCCTTTCTCCATCTCTCTACGCTCTCACGGGTTCAGGCACTGGAGAACCAGCGCG
ACCAGCTCCAAGTAGAGGTGGATGTGCTACGCCCCTTCATCGCCGAGCAAAACCGCCTCAATCAACAACAGCGCGAGCTC
GAGCAGCTCCTGGCCGTGCGCAACCAACTGCGCGAACGCTTCGTGCCCTGGTCGGATAATCTGGCCCTGGTCATCAATCA
GATTCCACGGGAAGGCCGCCGGTTTGGGGTGGCCCTGCGCAGCATCGGCACCAAGCTTCTCACACCCCAAGAAGTGCAAA
GCAACGTACAGAACGGTCTATACGACGGCAAACCGGTCAACGTGGAATTCAACCTCCAGGGCGAAGCCATCGGCCAGAAC
GCCCTGATTCGCTTCGTTGAGGCCTTCGAGACCTCACCGCGCTTCGGCATTAACTTCCAAAGCGCCAGCCTCGATCAGCA
ACGGCAGCTTTACACCTTTGGGGCCACCATCGGCCTGATTCGGCCAACCTCGGAGACGGCCAGCAACACATCGGGAGGTG
AAGATAGTGGTAGCCCTTCTCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
56.566 |
89.593 |
0.507 |