Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   CAH07_RS01975 Genome accession   NZ_CP021123
Coordinates   387379..387498 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain SEM-9     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 382379..392498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS01945 (CAH07_01915) - 383051..383614 (-) 564 WP_015483840.1 hypothetical protein -
  CAH07_RS01950 (CAH07_01920) - 383607..384254 (-) 648 WP_029318689.1 ABC transporter ATP-binding protein -
  CAH07_RS01965 (CAH07_01935) - 385730..386416 (-) 687 WP_241495663.1 hypothetical protein -
  CAH07_RS01970 (CAH07_01940) - 386676..387152 (-) 477 WP_015384936.1 hypothetical protein -
  CAH07_RS01975 (CAH07_01945) phrF 387379..387498 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  CAH07_RS01980 (CAH07_01950) rapF 387482..388627 (-) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  CAH07_RS01990 (CAH07_01960) ywhK 388857..390212 (+) 1356 WP_015250986.1 YncE family protein -
  CAH07_RS01995 (CAH07_01965) ywhL 390251..391627 (+) 1377 WP_101172255.1 YncE family protein -
  CAH07_RS02000 (CAH07_01970) albG 391633..392334 (-) 702 WP_029318695.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=228359 CAH07_RS01975 WP_009968329.1 387379..387498(-) (phrF) [Bacillus subtilis strain SEM-9]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=228359 CAH07_RS01975 WP_009968329.1 387379..387498(-) (phrF) [Bacillus subtilis strain SEM-9]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment