Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   SPS_RS07670 Genome accession   NC_004606
Coordinates   1481256..1482611 (-) Length   451 a.a.
NCBI ID   WP_011106858.1    Uniprot ID   -
Organism   Streptococcus pyogenes SSI-1     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 1476256..1487611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPS_RS07660 (SPs1478) rnc 1479308..1480000 (-) 693 WP_002990670.1 ribonuclease III -
  SPS_RS07665 (SPs1479) vicX 1480443..1481252 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  SPS_RS07670 (SPs1480) vicK 1481256..1482611 (-) 1356 WP_011106858.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SPS_RS07675 (SPs1481) vicR 1482604..1483314 (-) 711 WP_002985645.1 response regulator YycF Regulator
  SPS_RS07680 (SPs1482) - 1483476..1484471 (-) 996 WP_011054269.1 DUF3114 domain-containing protein -
  SPS_RS07685 (SPs1483) - 1484567..1485814 (-) 1248 WP_011054268.1 AMP-binding protein -
  SPS_RS07690 (SPs1484) - 1485771..1486919 (-) 1149 WP_011054267.1 acetyl-CoA C-acyltransferase -
  SPS_RS07695 - 1487314..1487463 (-) 150 WP_002994198.1 hypothetical protein -

Sequence


Protein


Download         Length: 451 a.a.        Molecular weight: 51519.95 Da        Isoelectric Point: 5.4026

>NTDB_id=22817 SPS_RS07670 WP_011106858.1 1481256..1482611(-) (vicK) [Streptococcus pyogenes SSI-1]
MTRDIIGNLSTFELAILILLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDIIDEKADIELMELSDQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLSKEEALKKNITDLLEGDTSYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLAVEMTNFTAFITSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWIEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKTDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDVD

Nucleotide


Download         Length: 1356 bp        

>NTDB_id=22817 SPS_RS07670 WP_011106858.1 1481256..1482611(-) (vicK) [Streptococcus pyogenes SSI-1]
ATGACTAGAGATATCATTGGAAACTTATCCACATTTGAATTAGCGATCCTTATCTTACTTGTTTTTGTTGCTTTTTACTT
TATCCATCTTGCGGTGCGTGATTACCGAAATGCACGTATTATTCGGATGATGAGCCATAAAATCCGAGACTTGATTAATG
GTCGCTATACTGATATAATCGACGAAAAAGCAGACATTGAGTTAATGGAGCTTTCAGACCAGTTAAATGACCTGTCAGAT
GTTTTTCGCTTGACGCATGAAAATCTTGCCCAAGAAAAAAATCGCTTGGCAAGTATTTTGGCTTATATGTCAGATGGTGT
ACTTGCTACAGACCGGTCTGGTAAAATCATCATGATTAACGAGACAGCTCGCAAGCAATTAAATTTAAGTAAAGAAGAGG
CACTAAAGAAAAACATTACAGATTTGTTAGAAGGTGATACTTCATATACTTACCGTGATTTGGTATCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGTGAGTTTGTCTCATTACGCTTGCGCTTTGCGTTGAATAGGAGAGAGAGTGG
TTTTATTTCGGGCTTGGTTGTGGTGCTCCATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTCT
CTAATGTAAGTCATGAATTAAGGACCCCTTTAACTTCGGTTAAATCCTACTTGGAGGCTCTTGATGAAGGTGCACTTAAA
GAAGATATTGCTCCAAGTTTCATAAAAGTTTCTCTTGATGAAACTAATCGGATGATGCGTATGATTTCAGATCTTTTAAA
CCTGTCTCGGATTGATAATCAAGTAACCCAATTAGCAGTAGAGATGACTAATTTTACTGCTTTTATAACTTCTATTTTAA
ACAGATTTGATTTGGTTAAAAATCAGCATACAGGTACAGGAAAAGTCTATGAAATTGTAAGAGATTACCCTATTACCTCT
GTCTGGATTGAAATTGATAATGATAAAATGACACAGGTTATCGAGAATATTTTGAACAATGCCATTAAGTATTCTCCAGA
TGGTGGAAAAATCACAGTCCGTATGAAAACAACAGATACCCAATTAATTATTTCCATTTCAGACCAAGGACTAGGTATCC
CTAAAACAGATTTGCCTCTTATTTTTGATCGGTTCTATCGTGTAGACAAGGCAAGAAGTCGTGCCCAAGGAGGGACCGGT
CTAGGCCTTGCCATTGCTAAAGAAATCATCAAGCAGCAGCACCATGGCTTTATCTGGGCTAAGAGTGACTATGGTAAAGG
ATCGACCTTTACTATTGTCTTGCCTTATGAAAAAGATGCAGCCATCTATGAAGAATGGGAGGAAGATGTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

72.771

92.018

0.67

  micB Streptococcus pneumoniae Cp1015

67.606

94.457

0.639


Multiple sequence alignment