Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SPS_RS07665 Genome accession   NC_004606
Coordinates   1480443..1481252 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes SSI-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1475443..1486252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPS_RS07655 (SPs1477) smc 1475780..1479307 (-) 3528 WP_011054270.1 chromosome segregation protein SMC -
  SPS_RS07660 (SPs1478) rnc 1479308..1480000 (-) 693 WP_002990670.1 ribonuclease III -
  SPS_RS07665 (SPs1479) vicX 1480443..1481252 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  SPS_RS07670 (SPs1480) vicK 1481256..1482611 (-) 1356 WP_011106858.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SPS_RS07675 (SPs1481) vicR 1482604..1483314 (-) 711 WP_002985645.1 response regulator YycF Regulator
  SPS_RS07680 (SPs1482) - 1483476..1484471 (-) 996 WP_011054269.1 DUF3114 domain-containing protein -
  SPS_RS07685 (SPs1483) - 1484567..1485814 (-) 1248 WP_011054268.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=22816 SPS_RS07665 WP_002985641.1 1480443..1481252(-) (vicX) [Streptococcus pyogenes SSI-1]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=22816 SPS_RS07665 WP_002985641.1 1480443..1481252(-) (vicX) [Streptococcus pyogenes SSI-1]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment