Detailed information NTG0227805

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: B6257_RS07235
• Genome accession: NZ_CP021011
• Coordinates: 1381880..1383043 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GFP-2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1376880..1388043

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6257_RS07205 (B6257_07170)	-	1377145..1377564 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
B6257_RS07210 (B6257_07175)	comFC	1377638..1378327 (-)	690	WP_199445943.1	phosphoribosyltransferase family protein	Machinery gene
B6257_RS07215 (B6257_07180)	-	1378333..1378617 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
B6257_RS07220 (B6257_07185)	comFA	1378675..1380060 (-)	1386	WP_101562487.1	DEAD/DEAH box helicase	Machinery gene
B6257_RS07225 (B6257_07190)	-	1380168..1381016 (-)	849	WP_101562488.1	DegV family protein	-
B6257_RS07230 (B6257_07195)	degU	1381114..1381803 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
B6257_RS07235 (B6257_07200)	degS	1381880..1383043 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
B6257_RS07240 (B6257_07205)	-	1383266..1383913 (+)	648	WP_060657503.1	YigZ family protein	-
B6257_RS07245 (B6257_07210)	-	1383918..1385132 (+)	1215	WP_101562489.1	LCP family protein	-
B6257_RS07250 (B6257_07215)	-	1385222..1386298 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
B6257_RS07255 (B6257_07220)	tuaH	1386431..1387627 (-)	1197	WP_101562490.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=227805 B6257_RS07235 WP_003151385.1 1381880..1383043(-) (degS) [Bacillus velezensis strain GFP-2]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=227805 B6257_RS07235 WP_003151385.1 1381880..1383043(-) (degS) [Bacillus velezensis strain GFP-2]
ATGAACAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948