Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | VP_RS13705 | Genome accession | NC_004603 |
| Coordinates | 2956816..2957448 (+) | Length | 210 a.a. |
| NCBI ID | WP_005381432.1 | Uniprot ID | U2ZZI4 |
| Organism | Vibrio parahaemolyticus RIMD 2210633 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2951816..2962448
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VP_RS13680 (VP2788) | - | 2951836..2953755 (+) | 1920 | WP_005480039.1 | ABC transporter ATP-binding protein | - |
| VP_RS13685 (VP2789) | - | 2953752..2954240 (+) | 489 | WP_005458139.1 | TIGR02444 family protein | - |
| VP_RS13690 (VP2790) | - | 2954327..2955334 (+) | 1008 | WP_005480025.1 | hydrolase | - |
| VP_RS13695 (VP2791) | - | 2955368..2955580 (+) | 213 | WP_005480073.1 | YheU family protein | - |
| VP_RS13700 (VP2792) | - | 2955706..2956575 (+) | 870 | WP_005458134.1 | phosphoribulokinase | - |
| VP_RS13705 (VP2793) | crp | 2956816..2957448 (+) | 633 | WP_005381432.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| VP_RS13710 (VP2794) | - | 2957605..2958396 (-) | 792 | WP_005480067.1 | DUF1338 domain-containing protein | - |
| VP_RS13715 (VP2795) | astD | 2958639..2960096 (-) | 1458 | WP_005480036.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| VP_RS13720 (VP2796) | astA | 2960125..2961144 (-) | 1020 | WP_005480046.1 | arginine N-succinyltransferase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23665.48 Da Isoelectric Point: 7.8388
>NTDB_id=22765 VP_RS13705 WP_005381432.1 2956816..2957448(+) (crp) [Vibrio parahaemolyticus RIMD 2210633]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
Nucleotide
Download Length: 633 bp
>NTDB_id=22765 VP_RS13705 WP_005381432.1 2956816..2957448(+) (crp) [Vibrio parahaemolyticus RIMD 2210633]
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCAGGTGAAAAAGCTGAAACGTTGTACTACATCGTTAAAGGCTCTGTTGCGGTTCTTATCAAGG
ACGAAGAAGGTAAGGAAATGATTCTTTCTTACCTAAACCAAGGTGACTTTATTGGTGAACTTGGTCTATTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTTGCTGAAATTTCTTTCAAGAAGTTCCGTCAGCTTAT
CCAAGTAAACCCAGACATCCTAATGCGTCTTTCTGCGCAGATGGCTCGTCGTCTTCAAGTAACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACGCTTCTGAACCTTGCTAAACAACCAGATGCGATGACTCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACAGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATCTCTGCGCACGGTAAAACTATCGTTGTTTACGGTACTCGTTAA
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCAGGTGAAAAAGCTGAAACGTTGTACTACATCGTTAAAGGCTCTGTTGCGGTTCTTATCAAGG
ACGAAGAAGGTAAGGAAATGATTCTTTCTTACCTAAACCAAGGTGACTTTATTGGTGAACTTGGTCTATTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTTGCTGAAATTTCTTTCAAGAAGTTCCGTCAGCTTAT
CCAAGTAAACCCAGACATCCTAATGCGTCTTTCTGCGCAGATGGCTCGTCGTCTTCAAGTAACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACGCTTCTGAACCTTGCTAAACAACCAGATGCGATGACTCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACAGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATCTCTGCGCACGGTAAAACTATCGTTGTTTACGGTACTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Vibrio cholerae strain A1552 |
98.095 |
100 |
0.981 |
| crp | Haemophilus influenzae Rd KW20 |
75.49 |
97.143 |
0.733 |
| crp | Acinetobacter baumannii D1279779 |
47.826 |
98.571 |
0.471 |