Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MARSALSMR5_RS01940 Genome accession   NZ_CP020931
Coordinates   443024..443416 (-) Length   130 a.a.
NCBI ID   WP_007154228.1    Uniprot ID   -
Organism   Marinobacter salarius strain SMR5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 438024..448416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MARSALSMR5_RS01920 (MARSALSMR5_00395) - 438969..439868 (-) 900 WP_036211386.1 protein-glutamate O-methyltransferase CheR -
  MARSALSMR5_RS01925 (MARSALSMR5_00396) - 439896..441971 (-) 2076 WP_036211383.1 methyl-accepting chemotaxis protein -
  MARSALSMR5_RS01930 (MARSALSMR5_00397) - 442063..442608 (-) 546 WP_007154226.1 chemotaxis protein CheW -
  MARSALSMR5_RS01935 (MARSALSMR5_00398) pilH 442629..442991 (-) 363 WP_007154227.1 twitching motility response regulator PilH -
  MARSALSMR5_RS01940 (MARSALSMR5_00399) pilG 443024..443416 (-) 393 WP_007154228.1 twitching motility response regulator PilG Regulator
  MARSALSMR5_RS01945 (MARSALSMR5_00400) gshB 443712..444659 (+) 948 WP_075194698.1 glutathione synthase -
  MARSALSMR5_RS01950 (MARSALSMR5_00401) - 444699..445565 (+) 867 WP_085678515.1 energy transducer TonB -
  MARSALSMR5_RS01955 (MARSALSMR5_00402) - 445562..446128 (+) 567 WP_036211379.1 YqgE/AlgH family protein -
  MARSALSMR5_RS01960 (MARSALSMR5_00403) ruvX 446121..446561 (+) 441 WP_041333003.1 Holliday junction resolvase RuvX -
  MARSALSMR5_RS01965 (MARSALSMR5_00404) pyrR 446594..447103 (+) 510 WP_036211374.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MARSALSMR5_RS01970 (MARSALSMR5_00405) - 447135..448148 (+) 1014 WP_075194700.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14594.87 Da        Isoelectric Point: 6.3343

>NTDB_id=227233 MARSALSMR5_RS01940 WP_007154228.1 443024..443416(-) (pilG) [Marinobacter salarius strain SMR5]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPNIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=227233 MARSALSMR5_RS01940 WP_007154228.1 443024..443416(-) (pilG) [Marinobacter salarius strain SMR5]
ATGGATGACAACTTCGAGAATCTGAAGATTATGGTGATCGACGACAGCAAGACCATTCGTCGCACCGCCGAAACCCTTCT
TAAGAAAGTCGGTTGCGAAGTCATTACCGCAACGGATGGCTTTGACGCTCTGGCGAAAATCGCCGATTCCCAACCCAATA
TCATTTTCGTCGATATCATGATGCCCCGGTTGGACGGCTACCAGACCTGCGCACTGATCAAGAACAACTCCTCTTTCAAA
AAGACGCCGGTCATCATGCTCTCCAGTAAAGACGGACTGTTCGACAAGGCCAAAGGCCGGATTGTCGGTTCAGACCAGTA
TCTGACCAAACCGTTCAGCAAGGACGAGCTTCTAAACACGATTCGCCAGTATGTTCCCCAGGCGGAACAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

41.322

93.077

0.385
  micA Streptococcus pneumoniae Cp1015

43.119

83.846

0.362

Multiple sequence alignment