Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   B9L64_RS11320 Genome accession   NZ_CP020915
Coordinates   2210141..2210260 (+) Length   39 a.a.
NCBI ID   WP_041334633.1    Uniprot ID   A0AA96UN30
Organism   Bacillus subtilis strain 50-1     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2205141..2215260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS11295 albG 2205305..2206006 (+) 702 WP_003243391.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  B9L64_RS11300 ywhL 2206012..2207388 (-) 1377 WP_110109508.1 YncE family protein -
  B9L64_RS11305 ywhK 2207427..2208782 (-) 1356 WP_015250986.1 YncE family protein -
  B9L64_RS21370 - 2208779..2209009 (-) 231 WP_024572000.1 hypothetical protein -
  B9L64_RS11315 rapF 2209012..2210157 (+) 1146 WP_086344441.1 response regulator aspartate phosphatase RapF Regulator
  B9L64_RS11320 phrF 2210141..2210260 (+) 120 WP_041334633.1 phosphatase RapF inhibitor PhrF Regulator
  B9L64_RS11325 - 2210358..2210820 (+) 463 Protein_2230 YbaK/EbsC family protein -
  B9L64_RS11330 speB 2210852..2211724 (-) 873 WP_003227545.1 agmatinase -
  B9L64_RS11335 speE 2211785..2212615 (-) 831 WP_003227543.1 spermidine synthase -
  B9L64_RS11340 pbpG 2212817..2214892 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4215.16 Da        Isoelectric Point: 9.5675

>NTDB_id=227092 B9L64_RS11320 WP_041334633.1 2210141..2210260(+) (phrF) [Bacillus subtilis strain 50-1]
MKLKSKLLLSCLALCTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=227092 B9L64_RS11320 WP_041334633.1 2210141..2210260(+) (phrF) [Bacillus subtilis strain 50-1]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTATGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

97.436

100

0.974
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment