Detailed information NTG0227091

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: B9L64_RS11315
• Genome accession: NZ_CP020915
• Coordinates: 2209012..2210157 (+)
• Length: 381 a.a.
• NCBI ID: WP_086344441.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain 50-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2204012..2215157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9L64_RS11290	albF	2204028..2205308 (+)	1281	WP_003242974.1	pitrilysin family protein	-
B9L64_RS11295	albG	2205305..2206006 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
B9L64_RS11300	ywhL	2206012..2207388 (-)	1377	WP_110109508.1	YncE family protein	-
B9L64_RS11305	ywhK	2207427..2208782 (-)	1356	WP_015250986.1	YncE family protein	-
B9L64_RS21370	-	2208779..2209009 (-)	231	WP_024572000.1	hypothetical protein	-
B9L64_RS11315	rapF	2209012..2210157 (+)	1146	WP_086344441.1	response regulator aspartate phosphatase RapF	Regulator
B9L64_RS11320	phrF	2210141..2210260 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
B9L64_RS11325	-	2210358..2210820 (+)	463	Protein_2230	YbaK/EbsC family protein	-
B9L64_RS11330	speB	2210852..2211724 (-)	873	WP_003227545.1	agmatinase	-
B9L64_RS11335	speE	2211785..2212615 (-)	831	WP_003227543.1	spermidine synthase	-
B9L64_RS11340	pbpG	2212817..2214892 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45631.11 Da
• Isoelectric Point: 5.1503

>NTDB_id=227091 B9L64_RS11315 WP_086344441.1 2209012..2210157(+) (rapF) [Bacillus subtilis strain 50-1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=227091 B9L64_RS11315 WP_086344441.1 2209012..2210157(+) (rapF) [Bacillus subtilis strain 50-1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572