Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | B9C53_RS17800 | Genome accession | NZ_CP020874 |
| Coordinates | 3626937..3627203 (+) | Length | 88 a.a. |
| NCBI ID | WP_042635730.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain GYL4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3621937..3632203
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9C53_RS17780 (B9C53_17720) | - | 3622202..3623503 (-) | 1302 | WP_038459188.1 | hemolysin family protein | - |
| B9C53_RS17785 (B9C53_17725) | - | 3623649..3624599 (+) | 951 | WP_032874012.1 | magnesium transporter CorA family protein | - |
| B9C53_RS17790 (B9C53_17730) | comGA | 3624796..3625866 (+) | 1071 | WP_038459186.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| B9C53_RS17795 (B9C53_17735) | comGB | 3625853..3626890 (+) | 1038 | WP_038459183.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| B9C53_RS17800 (B9C53_17740) | comGC | 3626937..3627203 (+) | 267 | WP_042635730.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| B9C53_RS17805 (B9C53_17745) | comGD | 3627193..3627630 (+) | 438 | WP_038459181.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| B9C53_RS17810 (B9C53_17750) | comGE | 3627614..3627928 (+) | 315 | WP_038459179.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| B9C53_RS17815 (B9C53_17755) | comGF | 3627837..3628337 (+) | 501 | WP_228842201.1 | competence type IV pilus minor pilin ComGF | - |
| B9C53_RS17820 (B9C53_17760) | comGG | 3628338..3628715 (+) | 378 | WP_038459177.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| B9C53_RS17825 (B9C53_17765) | - | 3628772..3628951 (+) | 180 | WP_022552966.1 | YqzE family protein | - |
| B9C53_RS17830 (B9C53_17770) | - | 3628992..3629321 (-) | 330 | WP_038459175.1 | DUF3889 domain-containing protein | - |
| B9C53_RS17835 (B9C53_17775) | tapA | 3629580..3630251 (+) | 672 | WP_108655004.1 | amyloid fiber anchoring/assembly protein TapA | - |
| B9C53_RS17840 (B9C53_17780) | sipW | 3630223..3630807 (+) | 585 | WP_012117977.1 | signal peptidase I SipW | - |
| B9C53_RS17845 (B9C53_17785) | tasA | 3630872..3631657 (+) | 786 | WP_044802563.1 | biofilm matrix protein TasA | - |
| B9C53_RS17850 (B9C53_17790) | sinR | 3631705..3632040 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 9721.32 Da Isoelectric Point: 6.2027
>NTDB_id=226804 B9C53_RS17800 WP_042635730.1 3626937..3627203(+) (comGC) [Bacillus velezensis strain GYL4]
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
MLIVLFIVSILLLITIPNVTKHNQSIQHKGCEGLQNMVKAQVTAYEIDHEGKMPDMNDLQSEGYIKKNTACPNGKQILIS
GGEVTVEQ
Nucleotide
Download Length: 267 bp
>NTDB_id=226804 B9C53_RS17800 WP_042635730.1 3626937..3627203(+) (comGC) [Bacillus velezensis strain GYL4]
ATGCTGATTGTTTTATTTATCGTTTCCATTCTGCTTTTAATTACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAGGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGATCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACTGTTGAACAATAA
ATGCTGATTGTTTTATTTATCGTTTCCATTCTGCTTTTAATTACCATTCCTAACGTTACAAAACATAATCAAAGCATTCA
GCATAAGGGCTGTGAAGGACTGCAGAATATGGTGAAAGCCCAAGTGACGGCGTACGAAATCGATCATGAAGGTAAAATGC
CGGATATGAACGATTTACAATCAGAGGGGTATATCAAAAAGAATACAGCCTGCCCGAATGGTAAACAGATCTTAATTAGT
GGCGGAGAAGTTACTGTTGAACAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
74.648 |
80.682 |
0.602 |