Detailed information NTG0226765

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: B9C53_RS08155
• Genome accession: NZ_CP020874
• Coordinates: 1770826..1771974 (-)
• Length: 382 a.a.
• NCBI ID: WP_038456948.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GYL4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1765826..1776974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9C53_RS08125 (B9C53_08115)	-	1765964..1766722 (-)	759	WP_003156330.1	ABC transporter ATP-binding protein	-
B9C53_RS08130 (B9C53_08120)	-	1766716..1767663 (-)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
B9C53_RS08135 (B9C53_08125)	ceuB	1767653..1768606 (-)	954	WP_032872883.1	ABC transporter permease	Machinery gene
B9C53_RS08140 (B9C53_08130)	-	1769020..1770384 (+)	1365	WP_038456950.1	aspartate kinase	-
B9C53_RS08145 (B9C53_08135)	-	1770464..1770574 (+)	111	WP_369719092.1	YjcZ family sporulation protein	-
B9C53_RS08150 (B9C53_08140)	phrC	1770723..1770842 (-)	120	WP_033575081.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
B9C53_RS08155 (B9C53_08145)	rapC	1770826..1771974 (-)	1149	WP_038456948.1	Rap family tetratricopeptide repeat protein	Regulator
B9C53_RS08160 (B9C53_08150)	-	1772133..1773560 (-)	1428	WP_162472289.1	sensor histidine kinase	-
B9C53_RS08165 (B9C53_08155)	-	1773547..1774230 (-)	684	WP_007609386.1	response regulator transcription factor	-
B9C53_RS08170 (B9C53_08160)	-	1774443..1775873 (+)	1431	WP_038456945.1	ABC transporter permease	-
B9C53_RS08175 (B9C53_08165)	-	1775888..1776571 (+)	684	WP_038456944.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45505.73 Da
• Isoelectric Point: 4.9916

>NTDB_id=226765 B9C53_RS08155 WP_038456948.1 1770826..1771974(-) (rapC) [Bacillus velezensis strain GYL4]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISTCFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=226765 B9C53_RS08155 WP_038456948.1 1770826..1771974(-) (rapC) [Bacillus velezensis strain GYL4]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAATCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCACGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568