Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   B9C53_RS08135 Genome accession   NZ_CP020874
Coordinates   1767653..1768606 (-) Length   317 a.a.
NCBI ID   WP_032872883.1    Uniprot ID   -
Organism   Bacillus velezensis strain GYL4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1762653..1773606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9C53_RS08115 (B9C53_08105) - 1763532..1764956 (+) 1425 WP_038456952.1 MDR family MFS transporter -
  B9C53_RS08120 (B9C53_08110) - 1764998..1765942 (-) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  B9C53_RS08125 (B9C53_08115) - 1765964..1766722 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  B9C53_RS08130 (B9C53_08120) - 1766716..1767663 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  B9C53_RS08135 (B9C53_08125) ceuB 1767653..1768606 (-) 954 WP_032872883.1 ABC transporter permease Machinery gene
  B9C53_RS08140 (B9C53_08130) - 1769020..1770384 (+) 1365 WP_038456950.1 aspartate kinase -
  B9C53_RS08145 (B9C53_08135) - 1770464..1770574 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  B9C53_RS08150 (B9C53_08140) phrC 1770723..1770842 (-) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  B9C53_RS08155 (B9C53_08145) rapC 1770826..1771974 (-) 1149 WP_038456948.1 Rap family tetratricopeptide repeat protein Regulator
  B9C53_RS08160 (B9C53_08150) - 1772133..1773560 (-) 1428 WP_162472289.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34931.21 Da        Isoelectric Point: 9.6741

>NTDB_id=226763 B9C53_RS08135 WP_032872883.1 1767653..1768606(-) (ceuB) [Bacillus velezensis strain GYL4]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=226763 B9C53_RS08135 WP_032872883.1 1767653..1768606(-) (ceuB) [Bacillus velezensis strain GYL4]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCCAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTTAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAGTCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCGTCCTGGCTGCAGGGGGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment