Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   B9C53_RS08150 Genome accession   NZ_CP020874
Coordinates   1770723..1770842 (-) Length   39 a.a.
NCBI ID   WP_033575081.1    Uniprot ID   -
Organism   Bacillus velezensis strain GYL4     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1765723..1775842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9C53_RS08125 (B9C53_08115) - 1765964..1766722 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  B9C53_RS08130 (B9C53_08120) - 1766716..1767663 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  B9C53_RS08135 (B9C53_08125) ceuB 1767653..1768606 (-) 954 WP_032872883.1 ABC transporter permease Machinery gene
  B9C53_RS08140 (B9C53_08130) - 1769020..1770384 (+) 1365 WP_038456950.1 aspartate kinase -
  B9C53_RS08145 (B9C53_08135) - 1770464..1770574 (+) 111 WP_369719092.1 YjcZ family sporulation protein -
  B9C53_RS08150 (B9C53_08140) phrC 1770723..1770842 (-) 120 WP_033575081.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  B9C53_RS08155 (B9C53_08145) rapC 1770826..1771974 (-) 1149 WP_038456948.1 Rap family tetratricopeptide repeat protein Regulator
  B9C53_RS08160 (B9C53_08150) - 1772133..1773560 (-) 1428 WP_162472289.1 sensor histidine kinase -
  B9C53_RS08165 (B9C53_08155) - 1773547..1774230 (-) 684 WP_007609386.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4214.93 Da        Isoelectric Point: 8.0284

>NTDB_id=226764 B9C53_RS08150 WP_033575081.1 1770723..1770842(-) (phrC) [Bacillus velezensis strain GYL4]
MKLKSKWFVICLAAAAIFTVTGAGQTDQADFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=226764 B9C53_RS08150 WP_033575081.1 1770723..1770842(-) (phrC) [Bacillus velezensis strain GYL4]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGAGCAGGCCAGACAGA
TCAGGCTGACTTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

72.5

100

0.744

Multiple sequence alignment