Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   B7941_RS04580 Genome accession   NZ_CP020805
Coordinates   902736..903689 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain 9D-6     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 897736..908689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7941_RS04555 (B7941_04555) - 897783..899216 (+) 1434 WP_161968256.1 sensor histidine kinase -
  B7941_RS04560 (B7941_04560) rapC 899369..900517 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  B7941_RS04565 (B7941_04565) phrC 900501..900620 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  B7941_RS04570 (B7941_04570) - 900768..900878 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  B7941_RS04575 (B7941_04575) - 900958..902322 (-) 1365 WP_059366589.1 aspartate kinase -
  B7941_RS04580 (B7941_04580) ceuB 902736..903689 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  B7941_RS04585 (B7941_04585) - 903679..904626 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  B7941_RS04590 (B7941_04590) - 904620..905378 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  B7941_RS04595 (B7941_04595) - 905400..906344 (+) 945 WP_025284230.1 siderophore ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=225929 B7941_RS04580 WP_015239156.1 902736..903689(+) (ceuB) [Bacillus velezensis strain 9D-6]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=225929 B7941_RS04580 WP_015239156.1 902736..903689(+) (ceuB) [Bacillus velezensis strain 9D-6]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGGACGATGGACTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGGAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATTGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCATGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCAGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGAGTGATTATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment