Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   B5P37_RS01850 Genome accession   NZ_CP020773
Coordinates   359152..359781 (-) Length   209 a.a.
NCBI ID   WP_085236500.1    Uniprot ID   A0AAC9RSW5
Organism   Staphylococcus lutrae strain ATCC 700373     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 354152..364781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5P37_RS01820 (B5P37_01820) - 354417..355649 (-) 1233 WP_085236489.1 aminopeptidase -
  B5P37_RS01825 (B5P37_01825) - 355671..355874 (-) 204 WP_085238397.1 DUF1128 family protein -
  B5P37_RS01830 (B5P37_01830) - 356007..356465 (+) 459 WP_085236491.1 low molecular weight protein-tyrosine-phosphatase -
  B5P37_RS01835 (B5P37_01835) - 356473..356760 (+) 288 WP_085236494.1 YtxH domain-containing protein -
  B5P37_RS01840 (B5P37_01840) - 356977..358299 (+) 1323 WP_085236496.1 YihY/virulence factor BrkB family protein -
  B5P37_RS01845 (B5P37_01845) - 358328..358909 (+) 582 WP_085236498.1 carbonic anhydrase -
  B5P37_RS01850 (B5P37_01850) vraR 359152..359781 (-) 630 WP_085236500.1 response regulator transcription factor Regulator
  B5P37_RS01855 (B5P37_01855) vraS 359771..360814 (-) 1044 WP_085236502.1 sensor histidine kinase Regulator
  B5P37_RS01860 (B5P37_01860) liaF 360811..361512 (-) 702 WP_085236504.1 cell wall-active antibiotics response protein LiaF -
  B5P37_RS01865 (B5P37_01865) - 361525..361914 (-) 390 WP_085236506.1 hypothetical protein -
  B5P37_RS01870 (B5P37_01870) map 362013..362777 (-) 765 WP_085236508.1 type I methionyl aminopeptidase -
  B5P37_RS01875 (B5P37_01875) - 362873..363871 (+) 999 WP_085236510.1 aromatic acid exporter family protein -

Sequence

Protein


Download         Length: 209 a.a.        Molecular weight: 23340.96 Da        Isoelectric Point: 4.8810

>NTDB_id=225822 B5P37_RS01850 WP_085236500.1 359152..359781(-) (vraR) [Staphylococcus lutrae strain ATCC 700373]
MTVKVLFVDDHEMVRIGISSYLSTQPDIEVVGEGASGKEAIEKAHALKPDLILMDLLMTDMDGVEATAQIKKDLPQIKVV
MLTSYIEDKEVYRALDAGVDSYILKTTSANDIAEAVRKTNAGESVFEAEVLVKMRNRMKQRAELYELLTEREMEILLLIA
KGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHGLIE

Nucleotide


Download         Length: 630 bp        

>NTDB_id=225822 B5P37_RS01850 WP_085236500.1 359152..359781(-) (vraR) [Staphylococcus lutrae strain ATCC 700373]
ATGACAGTTAAAGTATTATTTGTAGATGATCATGAAATGGTTCGTATTGGTATTTCAAGTTATTTATCAACACAACCGGA
TATTGAAGTTGTAGGGGAAGGGGCTTCAGGTAAAGAAGCGATTGAAAAAGCTCATGCGCTTAAGCCGGATTTGATTTTAA
TGGACTTGTTGATGACCGATATGGACGGTGTAGAAGCAACAGCACAAATTAAGAAAGACTTACCTCAAATTAAGGTCGTT
ATGCTGACAAGTTACATCGAGGACAAGGAAGTTTATCGTGCGCTTGATGCTGGGGTAGATAGCTATATATTAAAAACGAC
GAGTGCAAATGATATCGCGGAAGCAGTCCGCAAAACCAATGCAGGGGAGTCCGTATTTGAAGCTGAAGTTTTAGTTAAAA
TGCGCAATCGTATGAAGCAACGTGCAGAATTATATGAGCTGTTAACAGAGCGGGAAATGGAAATATTATTATTGATTGCA
AAAGGGTATTCAAATCAAGAGATTGCAAGCGCCTCCCACATTACCATTAAAACTGTAAAAACACATGTGAGTAATATATT
GAGTAAGCTCGAAGTTCAAGATAGAACGCAGGCTGTTATTTATGCATTTCAACATGGCTTAATAGAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-202)

Response regulator receiver domain (Response_reg)

(5-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

91.866

100

0.919
  degU Bacillus subtilis subsp. subtilis str. 168

36.607

100

0.392

Multiple sequence alignment