Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   B5P37_RS01855 Genome accession   NZ_CP020773
Coordinates   359771..360814 (-) Length   347 a.a.
NCBI ID   WP_085236502.1    Uniprot ID   A0AAC9RN34
Organism   Staphylococcus lutrae strain ATCC 700373     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 354771..365814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B5P37_RS01825 (B5P37_01825) - 355671..355874 (-) 204 WP_085238397.1 DUF1128 family protein -
  B5P37_RS01830 (B5P37_01830) - 356007..356465 (+) 459 WP_085236491.1 low molecular weight protein-tyrosine-phosphatase -
  B5P37_RS01835 (B5P37_01835) - 356473..356760 (+) 288 WP_085236494.1 YtxH domain-containing protein -
  B5P37_RS01840 (B5P37_01840) - 356977..358299 (+) 1323 WP_085236496.1 YihY/virulence factor BrkB family protein -
  B5P37_RS01845 (B5P37_01845) - 358328..358909 (+) 582 WP_085236498.1 carbonic anhydrase -
  B5P37_RS01850 (B5P37_01850) vraR 359152..359781 (-) 630 WP_085236500.1 response regulator transcription factor Regulator
  B5P37_RS01855 (B5P37_01855) vraS 359771..360814 (-) 1044 WP_085236502.1 sensor histidine kinase Regulator
  B5P37_RS01860 (B5P37_01860) liaF 360811..361512 (-) 702 WP_085236504.1 cell wall-active antibiotics response protein LiaF -
  B5P37_RS01865 (B5P37_01865) - 361525..361914 (-) 390 WP_085236506.1 hypothetical protein -
  B5P37_RS01870 (B5P37_01870) map 362013..362777 (-) 765 WP_085236508.1 type I methionyl aminopeptidase -
  B5P37_RS01875 (B5P37_01875) - 362873..363871 (+) 999 WP_085236510.1 aromatic acid exporter family protein -
  B5P37_RS01880 (B5P37_01880) - 364049..365554 (-) 1506 WP_244898625.1 exo-alpha-sialidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39766.26 Da        Isoelectric Point: 6.0552

>NTDB_id=225823 B5P37_RS01855 WP_085236502.1 359771..360814(-) (vraS) [Staphylococcus lutrae strain ATCC 700373]
MNHYVRAIGSMLILVYSMLTTFFFIDKVFTNIIYFQGMFYTQILGIPVFIFLNLVVIFLCIIVGSVLAYKINQQNDWLKQ
QIERAFEGETVGINDQQIELYNETIELYQALVPLNQSLHKMRIKTQNLTNESYNLNDLKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETELAPPLDQQIPTLEKMIQDSQLEMRALLLHLRPIGLKNKSLGEGIKSLVTDLQRKVPMKVVQEI
DEIEVPKGIEDHLFRITQEAISNTLRHAKGTQVTVELLKLKDHLLLRIQDDGIGFNVNDQLEQSYGLKNMQERAIEIGAT
LHIVSLPDAGTRIEVKAPLEKEAKHDS

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=225823 B5P37_RS01855 WP_085236502.1 359771..360814(-) (vraS) [Staphylococcus lutrae strain ATCC 700373]
ATGAATCATTACGTCCGAGCCATTGGATCGATGTTAATACTCGTTTACAGTATGTTAACGACGTTCTTTTTTATTGATAA
AGTTTTTACTAACATTATTTATTTCCAGGGGATGTTTTATACACAAATTTTAGGGATACCGGTTTTCATATTTTTAAACT
TAGTCGTTATCTTTTTGTGTATTATCGTTGGGAGTGTGCTTGCTTATAAAATTAATCAACAAAACGATTGGCTCAAACAA
CAAATTGAGCGCGCATTTGAAGGTGAGACGGTAGGGATTAATGACCAACAAATTGAACTCTATAATGAAACCATTGAACT
TTATCAAGCATTGGTTCCTCTTAATCAGTCCCTTCATAAAATGCGAATTAAAACTCAAAATTTAACGAATGAATCATATA
ATTTAAATGATTTGAAGGTGAAAAAAATAATTGAAGATGAGCGACAAAGGCTCGCACGTGAATTGCATGACAGTGTCTCT
CAACAGCTTTTTGCAGCTAGTATGATGTTGTCTGCGATTAAAGAAACGGAATTAGCGCCACCCCTTGATCAACAAATTCC
AACACTTGAGAAAATGATTCAAGATTCACAGTTGGAGATGCGTGCGTTGTTGCTTCATTTGAGACCGATTGGATTAAAAA
ATAAATCACTCGGTGAGGGGATTAAATCGCTTGTGACAGATTTACAGCGGAAAGTTCCGATGAAAGTCGTTCAAGAAATT
GATGAAATTGAAGTGCCAAAAGGGATTGAAGATCATTTGTTTAGAATTACACAAGAAGCGATTTCCAATACATTACGCCA
TGCGAAAGGGACTCAAGTGACGGTTGAATTATTAAAACTTAAAGATCATTTGTTGCTCCGTATTCAAGATGATGGGATTG
GATTTAATGTGAATGATCAATTGGAACAAAGTTATGGTTTAAAAAATATGCAAGAGCGTGCCATTGAAATTGGAGCGACA
TTGCATATTGTGTCATTGCCCGATGCAGGAACAAGAATTGAAGTCAAAGCACCACTTGAAAAGGAGGCTAAACATGACAG
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

81.792

99.712

0.816


Multiple sequence alignment