Detailed information NTG0224978

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: B6V88_RS01600
• Genome accession: NZ_CP020615
• Coordinates: 347524..348606 (-)
• Length: 360 a.a.
• NCBI ID: WP_083011745.1
• Uniprot ID: -
• Organism: Legionella micdadei strain NZ2016
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 342524..353606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B6V88_RS01580 (B6V88_01580)	-	343492..343929 (+)	438	WP_045098242.1	hypothetical protein	-
B6V88_RS01585 (B6V88_01585)	-	344042..344665 (-)	624	WP_083011742.1	HAD hydrolase-like protein	-
B6V88_RS01590 (B6V88_01590)	topA	344794..347073 (-)	2280	WP_083011743.1	type I DNA topoisomerase	-
B6V88_RS01595 (B6V88_01595)	-	347103..347534 (-)	432	WP_045098245.1	DUF494 family protein	-
B6V88_RS01600 (B6V88_01600)	dprA	347524..348606 (-)	1083	WP_083011745.1	DNA-processing protein DprA	Machinery gene
B6V88_RS01605 (B6V88_01605)	def	348701..349212 (+)	512	Protein_321	peptide deformylase	-
B6V88_RS01610 (B6V88_01610)	fmt	349209..350153 (+)	945	WP_045098248.1	methionyl-tRNA formyltransferase	-
B6V88_RS01615 (B6V88_01615)	rsmB	350150..351430 (+)	1281	WP_083011747.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
B6V88_RS01620 (B6V88_01620)	-	351474..352220 (+)	747	WP_083011749.1	CPBP family glutamic-type intramembrane protease	-
B6V88_RS01625 (B6V88_01625)	-	352309..352818 (+)	510	WP_083011750.1	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 39743.78 Da
• Isoelectric Point: 6.9410

>NTDB_id=224978 B6V88_RS01600 WP_083011745.1 347524..348606(-) (dprA) [Legionella micdadei strain NZ2016]
MDNKYYLLALNRIQQIGPRTILKLLTYWPKLEEMFRLTSEQLQTAGLTPQLAESICQFDFSEVDVDLRWEEETNHHLLTW
DDPNYPLLLKEIHDPPPVLYLQGNASSLHQASIAIVGSRKPSITGAETAKRFSFELALRQLTVISGLAFGIDAQAHQGCI
EANGLTIAILGTGIDCVYPRQHGQLAQKICEKGLLVSEFPLKVGPKAGHFPRRNRIISGLALATLVVEATIRSGSLITAR
LALEQNRDVLAIPGSIYNPQARGCHHLLQQGAKLVTSSQEVIEELGLDNLVIKQSNTTQSLARDNKNLVKCIGFEITTVD
QIVRRSSLSVEEVACGLATLEIQGIIKAVPGGYMRCSYER

Nucleotide

• Length: 1083 bp

>NTDB_id=224978 B6V88_RS01600 WP_083011745.1 347524..348606(-) (dprA) [Legionella micdadei strain NZ2016]
ATGGATAACAAATATTATTTGCTCGCCCTTAACAGAATCCAACAAATCGGCCCAAGGACAATTCTAAAGCTGCTAACCTA
TTGGCCTAAGCTCGAAGAAATGTTTCGATTAACCTCCGAGCAATTGCAAACAGCCGGACTCACACCACAACTTGCCGAGT
CAATTTGCCAGTTTGATTTTAGCGAAGTCGATGTAGATTTACGTTGGGAAGAAGAAACCAATCACCATTTATTGACTTGG
GATGATCCTAATTACCCGTTGTTACTTAAAGAAATTCATGATCCGCCACCTGTTTTGTATTTACAAGGCAACGCTTCAAG
CCTCCATCAAGCGTCAATTGCGATTGTCGGTAGTCGTAAACCATCAATAACTGGTGCAGAAACCGCTAAGCGTTTTTCTT
TTGAATTAGCTTTAAGACAACTAACGGTTATCAGCGGCCTCGCTTTCGGCATCGATGCCCAAGCTCATCAAGGATGCATA
GAGGCTAATGGTCTAACCATCGCCATTTTAGGAACAGGAATCGACTGCGTTTACCCACGACAACATGGCCAACTCGCACA
AAAAATTTGCGAGAAAGGTTTATTGGTGAGTGAATTTCCCTTAAAGGTAGGTCCCAAAGCTGGACATTTCCCTCGTAGAA
ATCGTATAATAAGCGGTTTGGCATTAGCTACGTTAGTGGTTGAAGCAACCATTCGGAGCGGCTCATTGATTACAGCGCGC
CTCGCTTTGGAACAAAATCGCGACGTATTAGCCATACCAGGCTCTATTTACAACCCGCAAGCGCGCGGCTGTCATCATCT
ACTGCAACAAGGAGCAAAATTAGTTACATCAAGTCAAGAAGTAATTGAAGAGCTAGGACTGGATAACCTAGTTATAAAGC
AAAGTAATACGACGCAATCCCTTGCCAGAGATAACAAAAACCTAGTAAAGTGCATTGGCTTTGAAATTACGACTGTTGAT
CAAATTGTTAGGCGAAGCAGTTTAAGTGTTGAAGAGGTAGCTTGTGGTCTAGCCACACTGGAAATACAGGGTATCATTAA
AGCCGTACCCGGGGGTTATATGAGGTGTTCATATGAAAGATAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (297-352)

• DNA recombination-mediator protein A (DNA_processg_A) (72-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Legionella pneumophila strain ERS1305867	59.834	100	0.6
dprA	Vibrio campbellii strain DS40M4	46.505	91.389	0.425
dprA	Vibrio cholerae strain A1552	41.944	100	0.419
dprA	Glaesserella parasuis strain SC1401	40.489	100	0.414