Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   B7L41_RS05120 Genome accession   NZ_CP020595
Coordinates   943583..943993 (+) Length   136 a.a.
NCBI ID   WP_001200131.1    Uniprot ID   A0A0J1A5R4
Organism   Acinetobacter baumannii strain USA15     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 938583..948993
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L41_RS05105 (B7L41_05105) - 939572..941878 (+) 2307 WP_000259109.1 RelA/SpoT family protein -
  B7L41_RS05110 (B7L41_05110) - 941923..942696 (-) 774 WP_000682841.1 SDR family oxidoreductase -
  B7L41_RS05115 (B7L41_05115) mazG 942808..943614 (+) 807 WP_000359493.1 nucleoside triphosphate pyrophosphohydrolase -
  B7L41_RS05120 (B7L41_05120) comEA 943583..943993 (+) 411 WP_001200131.1 ComEA family DNA-binding protein Machinery gene
  B7L41_RS05125 (B7L41_05125) pcnB 944118..945581 (+) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  B7L41_RS05130 (B7L41_05130) folK 945578..946060 (+) 483 WP_000219215.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  B7L41_RS05135 (B7L41_05135) panB 946106..946915 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  B7L41_RS05140 (B7L41_05140) panC 946919..947767 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  B7L41_RS05145 (B7L41_05145) rapZ 947790..948641 (+) 852 WP_000821671.1 RNase adapter RapZ -
  B7L41_RS05150 (B7L41_05150) - 948638..948907 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 15650.89 Da        Isoelectric Point: 10.3828

>NTDB_id=224739 B7L41_RS05120 WP_001200131.1 943583..943993(+) (comEA) [Acinetobacter baumannii strain USA15]
MQYSIRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=224739 B7L41_RS05120 WP_001200131.1 943583..943993(+) (comEA) [Acinetobacter baumannii strain USA15]
ATGCAATACAGCATAAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGGCAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains


Predicted by InterproScan.

(74-134)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0J1A5R4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963

  comEA Acinetobacter baumannii D1279779

95.588

100

0.956

  comEA Acinetobacter baylyi ADP1

41.985

96.324

0.404


Multiple sequence alignment