Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   B7L36_RS19290 Genome accession   NZ_CP020586
Coordinates   3817244..3817654 (-) Length   136 a.a.
NCBI ID   WP_002017231.1    Uniprot ID   N9KEH5
Organism   Acinetobacter baumannii strain CBA7     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3812244..3822654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L36_RS19260 (B7L36_19265) - 3812330..3812599 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  B7L36_RS19265 (B7L36_19270) rapZ 3812596..3813447 (-) 852 WP_000821671.1 RNase adapter RapZ -
  B7L36_RS19270 (B7L36_19275) panC 3813470..3814318 (-) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  B7L36_RS19275 (B7L36_19280) panB 3814322..3815131 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  B7L36_RS19280 (B7L36_19285) folK 3815177..3815659 (-) 483 WP_000219213.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  B7L36_RS19285 (B7L36_19290) pcnB 3815656..3817119 (-) 1464 WP_001194207.1 polynucleotide adenylyltransferase PcnB -
  B7L36_RS19290 (B7L36_19295) comEA 3817244..3817654 (-) 411 WP_002017231.1 ComEA family DNA-binding protein Machinery gene
  B7L36_RS19295 (B7L36_19300) mazG 3817623..3818429 (-) 807 WP_000359483.1 nucleoside triphosphate pyrophosphohydrolase -
  B7L36_RS19300 (B7L36_19305) - 3818541..3819314 (+) 774 WP_000682841.1 SDR family oxidoreductase -
  B7L36_RS19305 (B7L36_19310) - 3819359..3821665 (-) 2307 WP_000259109.1 RelA/SpoT family protein -

Sequence


Protein


Download         Length: 136 a.a.        Molecular weight: 15654.89 Da        Isoelectric Point: 10.3828

>NTDB_id=224529 B7L36_RS19290 WP_002017231.1 3817244..3817654(-) (comEA) [Acinetobacter baumannii strain CBA7]
MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=224529 B7L36_RS19290 WP_002017231.1 3817244..3817654(-) (comEA) [Acinetobacter baumannii strain CBA7]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGATCAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCACTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAATTAAAAGGTGTAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains


Predicted by InterproScan.

(74-134)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB N9KEH5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

97.794

100

0.978

  comEA Acinetobacter baumannii D1279779

95.588

100

0.956

  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412


Multiple sequence alignment