Detailed information NTG0224520

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: C2E46_RS07870
• Genome accession: NZ_CP026082
• Coordinates: 1566908..1568899 (-)
• Length: 663 a.a.
• NCBI ID: WP_000567083.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain YZ1605
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1561908..1573899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2E46_RS07860 (C2E46_08120)	-	1564010..1565185 (+)	1176	WP_000191687.1	IS256-like element ISSag11 family transposase	-
C2E46_RS07865 (C2E46_08125)	-	1565317..1566810 (+)	1494	WP_161501916.1	helix-turn-helix domain-containing protein	-
C2E46_RS07870 (C2E46_08130)	uvrB	1566908..1568899 (-)	1992	WP_000567083.1	excinuclease ABC subunit UvrB	Machinery gene
C2E46_RS07875 (C2E46_08135)	-	1568960..1569880 (-)	921	WP_001042318.1	CPBP family intramembrane glutamic endopeptidase	-
C2E46_RS07880 (C2E46_08140)	-	1570063..1572246 (+)	2184	WP_000681011.1	ABC transporter substrate-binding protein/permease	-
C2E46_RS07885 (C2E46_08145)	-	1572246..1572986 (+)	741	WP_000818887.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 663 a.a.
• Molecular weight: 75988.03 Da
• Isoelectric Point: 4.7322

>NTDB_id=224520 C2E46_RS07870 WP_000567083.1 1566908..1568899(-) (uvrB) [Streptococcus agalactiae strain YZ1605]
MIDRKDTNRFKLVSKYSPSGDQPQAIETLVDNIEGGEKAQILKGATGTGKTYTMSQVITQVNKPTLVIAHNKTLAGQLYG
EFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYA
DSVVSLRPGQEISRDQLLNNLVDIQFERNDIDFQRGKFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGRVL
GEVEHLAIFPATHFMTNDEHMEEAISKIQAEMENQVELFEKEGKLIEAQRIRQRTEYDIEMLREMGYTNGVENYSRHMDG
RSEGEPPFTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGDYEMGQTDTVVEQIIRPTGLLDPEVEVRPSMGQMDDLLGEINLRTEKGERTFITTLTKRMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSNGHVIMYADK
ITDSMQRAMDETARRRRLQMDYNEKHGIVPQTIKKEIRDLIAITKSNDSDKPEKIVDYSSLSKKERQAEIKALQKQMQEA
AELLDFELAAQIRDVILKLKAID

Nucleotide

• Length: 1992 bp

>NTDB_id=224520 C2E46_RS07870 WP_000567083.1 1566908..1568899(-) (uvrB) [Streptococcus agalactiae strain YZ1605]
ATGATAGATAGAAAAGATACTAACCGATTTAAATTAGTTTCCAAATATAGTCCTTCGGGAGATCAACCTCAAGCTATTGA
AACGTTGGTTGACAATATTGAAGGAGGGGAAAAAGCTCAGATTTTAAAAGGTGCTACTGGTACTGGTAAAACCTACACAA
TGAGCCAAGTTATCACCCAAGTTAACAAGCCAACCTTGGTGATTGCACATAATAAAACCCTAGCAGGCCAACTTTATGGA
GAGTTTAAAGAATTTTTTCCTGACAATGCCGTAGAGTACTTTGTTTCATATTATGATTATTATCAACCAGAAGCTTATGT
GCCTTCTTCGGATACTTATATTGAAAAAGATAGTTCAGTCAATGACGAAATTGACAAATTACGTCACTCAGCGACTTCTT
CGTTATTAGAAAGAAATGACGTTATTGTTGTAGCATCTGTTTCTTGTATTTACGGTTTAGGTTCTCCTAAAGAGTATGCA
GACAGTGTTGTTAGCCTTAGGCCAGGTCAAGAAATTTCACGTGATCAGTTATTGAACAATCTCGTTGATATTCAATTTGA
GCGTAACGATATTGATTTTCAACGTGGAAAATTTCGCGTTCGTGGCGATGTTGTAGAAGTTTTTCCTGCGAGTCGTGATG
AGCATGCCTTTCGAATTGAATTTTTTGGTGATGAAATTGATCGTATAAGAGAAATAGAATCGTTAACAGGGCGTGTGCTA
GGAGAAGTGGAACATTTAGCTATTTTCCCAGCAACACACTTTATGACAAATGATGAACATATGGAAGAAGCTATTTCAAA
AATACAAGCTGAAATGGAAAATCAAGTAGAACTTTTTGAAAAAGAAGGGAAATTGATTGAAGCGCAACGTATTCGACAAA
GGACAGAATATGATATTGAAATGCTTCGTGAAATGGGATATACAAATGGTGTTGAGAACTACTCACGTCACATGGATGGT
AGAAGTGAAGGTGAGCCACCTTTTACTTTGTTAGATTTCTTCCCAGAAGATTTTTTGATTATGATTGATGAGAGTCACAT
GACAATGGGGCAAATCAAAGGGATGTATAATGGAGACCGTTCGCGTAAAGAAATGTTGGTTAATTACGGTTTTCGTTTAC
CATCTGCCTTAGATAACCGTCCACTTCGTCGTGAAGAATTCGAAAGCCATGTCCATCAAATTGTCTATGTATCTGCAACG
CCAGGAGACTATGAAATGGGGCAAACAGATACGGTTGTTGAGCAAATTATCCGGCCAACAGGACTTCTTGATCCAGAAGT
TGAAGTTAGACCAAGTATGGGGCAGATGGATGACTTGCTTGGCGAAATCAATTTGAGGACTGAAAAAGGTGAGCGTACCT
TTATTACAACATTGACAAAGCGTATGGCAGAAGACTTAACAGATTATCTCAAAGAAATGGGAGTTAAAGTTAAGTATATG
CACAGCGATATTAAAACCCTAGAACGTACAGAGATTATTCGTGATCTACGACTTGGTGTGTTTGATGTTTTAATTGGTAT
TAATCTCTTACGTGAAGGAATAGATGTTCCTGAGGTTTCCCTTGTTGCAATCTTAGATGCTGATAAGGAAGGTTTCCTTC
GTAATGAGCGTGGTCTTATCCAAACAATCGGACGTGCAGCACGTAACAGTAATGGTCATGTTATTATGTATGCTGATAAA
ATAACAGATTCTATGCAAAGAGCTATGGATGAAACCGCTCGCCGTCGCCGTTTACAAATGGACTATAATGAAAAGCATGG
AATTGTGCCACAAACAATTAAAAAAGAAATCCGTGATTTAATTGCTATTACTAAAAGTAATGACAGCGATAAACCTGAAA
AAATTGTCGATTACAGTAGTTTATCTAAGAAAGAAAGGCAAGCTGAAATTAAAGCTCTTCAAAAGCAAATGCAAGAAGCA
GCTGAATTATTGGACTTTGAGCTAGCTGCACAAATCCGAGATGTTATTTTAAAACTAAAAGCAATCGATTAA

Domains

Predicted by InterProScan.

• Ultra-violet resistance protein B (UvrB) (556-598)

• Type III restriction enzyme, res subunit (ResIII) (20-143)

• UvrB interaction domain (UvrB_inter) (164-254)

• UvrB/uvrC motif (UVR) (628-661)

• Helicase conserved C-terminal domain (Helicase_C) (446-549)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	87.029	100	0.87
uvrB	Streptococcus pneumoniae D39	87.029	100	0.87
uvrB	Streptococcus pneumoniae TIGR4	86.878	100	0.869