Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | B7L36_RS04550 | Genome accession | NZ_CP020586 |
| Coordinates | 832336..832818 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii strain CBA7 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 827336..837818
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L36_RS04540 (B7L36_04540) | pilX | 827639..828457 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| B7L36_RS04545 (B7L36_04545) | pilY1 | 828469..832323 (+) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| B7L36_RS04550 (B7L36_04550) | pilY2 | 832336..832818 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| B7L36_RS04555 (B7L36_04555) | pilE | 832815..833240 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| B7L36_RS04560 (B7L36_04560) | rpsP | 833387..833638 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| B7L36_RS04565 (B7L36_04565) | rimM | 833658..834206 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| B7L36_RS04570 (B7L36_04570) | trmD | 834252..834992 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| B7L36_RS04575 (B7L36_04575) | rplS | 835201..835569 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| B7L36_RS04580 (B7L36_04580) | - | 835622..836563 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| B7L36_RS04585 (B7L36_04585) | - | 836678..837712 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=224511 B7L36_RS04550 WP_001046420.1 832336..832818(+) (pilY2) [Acinetobacter baumannii strain CBA7]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=224511 B7L36_RS04550 WP_001046420.1 832336..832818(+) (pilY2) [Acinetobacter baumannii strain CBA7]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |