Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutX   Type   Machinery gene
Locus tag   C2E46_RS06625 Genome accession   NZ_CP026082
Coordinates   1292952..1293434 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain YZ1605     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1287952..1298434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2E46_RS06605 (C2E46_06810) alsS 1288211..1289893 (-) 1683 WP_161501878.1 acetolactate synthase AlsS -
  C2E46_RS06610 (C2E46_06815) - 1290003..1291229 (-) 1227 WP_000934873.1 hypothetical protein -
  C2E46_RS06615 (C2E46_06820) - 1291219..1292409 (-) 1191 WP_001081530.1 AI-2E family transporter -
  C2E46_RS06620 (C2E46_06825) - 1292501..1292962 (-) 462 WP_000796045.1 NUDIX hydrolase -
  C2E46_RS06625 (C2E46_06830) mutX 1292952..1293434 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  C2E46_RS06630 (C2E46_06835) hylB 1293651..1296869 (+) 3219 WP_161501879.1 hyaluronate lyase -
  C2E46_RS06635 (C2E46_06840) rfbB 1296921..1297961 (-) 1041 WP_000277597.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=224512 C2E46_RS06625 WP_000163512.1 1292952..1293434(-) (mutX) [Streptococcus agalactiae strain YZ1605]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=224512 C2E46_RS06625 WP_000163512.1 1292952..1293434(-) (mutX) [Streptococcus agalactiae strain YZ1605]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCGGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACCTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains


Predicted by InterProScan.

(3-130)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712


Multiple sequence alignment