Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SMU_RS07215 Genome accession   NC_004350
Coordinates   1522544..1523545 (-) Length   333 a.a.
NCBI ID   WP_002262797.1    Uniprot ID   A0AAX1K324
Organism   Streptococcus mutans UA159     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1517544..1528545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMU_RS07195 (SMU.1587c) - 1517579..1518217 (-) 639 WP_002352341.1 hypothetical protein -
  SMU_RS07200 (SMU.1588c) - 1518482..1519816 (-) 1335 WP_002262800.1 glycosyltransferase family 4 protein -
  SMU_RS07205 (SMU.1589c) - 1519818..1520816 (-) 999 WP_002262799.1 glycosyltransferase -
  SMU_RS07210 (SMU.1590) - 1520936..1522396 (-) 1461 WP_002263876.1 alpha-amylase -
  SMU_RS07215 (SMU.1591) ccpA 1522544..1523545 (-) 1002 WP_002262797.1 catabolite control protein A Regulator
  SMU_RS07220 (SMU.1592) - 1523708..1524787 (+) 1080 WP_002262796.1 M24 family metallopeptidase -
  SMU_RS07225 (SMU.1593c) - 1524878..1525459 (-) 582 WP_002262795.1 CDP-archaeol synthase -
  SMU_RS07230 (SMU.1595) - 1525586..1526356 (-) 771 WP_002268260.1 carbonic anhydrase -
  SMU_RS07235 (SMU.1596) celB 1526622..1527980 (-) 1359 WP_002262793.1 PTS cellobiose transporter subunit IIC -
  SMU_RS07240 (SMU.1597c) - 1527996..1528514 (-) 519 WP_002262792.1 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36613.89 Da        Isoelectric Point: 6.8583

>NTDB_id=22426 SMU_RS07215 WP_002262797.1 1522544..1523545(-) (ccpA) [Streptococcus mutans UA159]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYFS
ILAKGIDDIATMYKYNIVLASSDEDDDKEVNVINTLFAKQVDGIIFMGHHLTEKIRAEFSRARTPVVLSGTVDLEHQLPS
VNIDHSKAAQDAVALLAKHHDKIAFVSGPLIDDINGKVRLAGYKEGLKKKGLPFKEGLVFEAQYKYQEGYQLAQRVINSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSTIALYTRPNMTSISQPIYDLGAVAMRMLTKIMNKEELEEKEI
VLNHGIRERGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=22426 SMU_RS07215 WP_002262797.1 1522544..1523545(-) (ccpA) [Streptococcus mutans UA159]
ATGAACACAGATGACACAATCACTATTTATGATGTTGCCCGTGAAGCGGGAGTGTCCATGGCAACTGTCAGCCGTGTTGT
GAATGGAAATAAAAATGTCAAAGAGAATACCCGCAAAAAAGTCCTAGAAGTCATTGACCGTCTTGATTATCGGCCAAATG
CTGTGGCGCGTGGTTTGGCAAGTAAGAAAACGACTACGGTAGGTGTGGTTATCCCTAATATTGCTAATGCTTATTTTTCT
ATTTTAGCTAAGGGAATTGATGACATTGCAACCATGTATAAATATAATATTGTACTGGCTTCAAGTGATGAAGATGACGA
TAAGGAAGTCAATGTTATCAATACTTTATTTGCTAAACAGGTTGATGGTATTATTTTTATGGGACATCATTTAACTGAAA
AAATTCGCGCTGAATTTTCACGAGCACGGACACCGGTTGTTTTATCAGGTACTGTAGATCTGGAGCATCAACTCCCCAGT
GTTAATATTGATCATAGTAAGGCAGCACAAGATGCCGTAGCTTTATTGGCCAAACATCATGATAAGATTGCTTTTGTATC
GGGTCCCCTTATTGATGATATCAATGGCAAGGTACGTCTGGCTGGTTATAAAGAAGGCCTGAAAAAGAAAGGATTGCCTT
TCAAAGAAGGACTTGTTTTTGAAGCTCAATATAAGTATCAAGAAGGATATCAGTTAGCGCAGCGTGTCATTAATTCAGGC
GCAACAGCTGCTTATGTTGCTGAGGATGAGTTGGCTGCTGGGCTGTTAAATGGTTTGTTTGCTGCTGGTAAGAAAGTCCC
AGAAGACTTTGAAATTATCACGAGTAATGACTCTACTATTGCGCTTTATACTCGTCCTAATATGACATCTATCAGTCAGC
CGATTTATGATTTAGGAGCAGTTGCTATGCGCATGTTAACAAAGATTATGAACAAGGAAGAATTGGAAGAAAAAGAAATT
GTTCTTAATCATGGTATCAGAGAAAGAGGAACAACTAAATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(175-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.378

100

0.784
  ccpA Streptococcus pneumoniae D39

75.976

100

0.76
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556

Multiple sequence alignment